SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene122873

Length: 421 nt

UniGene Fasta

>sp_v3.0_unigene122873
TATTGGTCCTATTCCACTTGAGTGGAGTAATTCCATCTATGCTTGGAAGTTGTGTTGAACTATTTCATTGAATTTGTCTCAAAATTCCTTCCAAGGTTCTATTCCAAATTCACTTGAAAATTGAAAAAGTATTACTAGCCTAGACCTCTCTTCCAAATCCTTATCAAGTACCATACCACGTGCTCTCAACAAGTTGAAGATGCTTCAATATTTGGATTTGTCTTTCAACAAGCTCATTGGGGAAATTCCAAAAGGAGGGATTTTTTGCAAATCAATAAATTGTCATTTCCTTAAAAGGAAATCCCGACCTTGGTGGACTACAAGAATTCCAATTATCTTCATGTCCAACCCTAAGAGATCCTTCTACAATTGTGAAAAGAGTACTATTGCTAGTGAGGGGATTATTGCTTTTATACTATGT

Ace file of the UniGene sp_v3.0_unigene122873

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Uncharacterized protein; Cryptomeria japonica (Japanese cedar) (Cupressus japonica).	-	-	0.0	50%
Sma3	Leucine-rich repeat disease resistance protein-like	-	-	1.323e-12	-

Source	Gene names
Sma3	At3g24954; At3g25010; At3g25020; GSVIVT00029735001; LOC_Os10g13970; LOC_Os11g47030; OJ1004_F02.15; OSJNBa0014J14.8; Os11g0692500; OsI_33019; OsJ_31022;

Source	GOs	Term	Type	Identity
Sma3	protein serine/threonine kinase activity	GO:0004674	Molecular Function	-
Sma3	protein binding	GO:0005515	Molecular Function	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	protein phosphorylation	GO:0006468	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Leucine-rich repeat	IPR001611	-	-
Sma3	Leucine-rich repeat, typical subtype	IPR003591	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	Leucine-rich repeat-containing N-terminal, type 2	IPR013210	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-

Full-Lengther Next Prediction

Fln status: Putative C-terminus

Fln database: coniferopsida.fasta

Fln subject: I4DUG2

Fln msg: Unexpected stop codon in the beginning of your sequence, STOP codon was not found. Distance to subject end: 11 aas, your sequence is shorter than subject: 140 - 743

Fln protein: IGPIPLEWSNSIYAWKLC*TISLNLSQNSFQGSIPNSLEN*KSITSLDLSSKSLSSTIPRALNKLKMLQYLDLSFNKLIGEIPKGGIFCKSINCHFLKRKSRPWWTTRIPIIFMSNPKRSFYNCEKSTIASEGIIAFILC

Protein Length: 141

Fln nts: TATTGGTCCTATTCCACTTGAGTGGAGTAATTCCATCTATGCTTGGAAGTTGTGTTGAACTATTTCATTGAATTTGTCTCAAAATTCCTTCCAAGGTTCTATTCCAAATTCACTTGAAAATTGAAAAAGTATTACTAGCCTAGACCTCTCTTCCAAATCCTTATCAAGTACCATACCACGTGCTCTCAACAAGTTGAAGATGCTTCAATATTTGGATTTGTCTTTCAACAAGCTCATTGGGGAAATTCCAAAAGGAGGGATTTTTTGCAAATCAATAAATTGTCATTTCCTTAAAAGGAAATCCCGACCTTGGTGGACTACAAGAATTCCAATTATCTTCATGTCCAACCCTAAGAGATCCTTCTACAATTGTGAAAAGAGTACTATTGCTAGTGAGGGGATTATTGCTTTTATACTATGT

Fln Alignment:

AllPine_a_c59140___LNLSQNSFQGSIPNSLENXXXXXXXXXXXXXXXXXXPRALNKLKMLQYLDLSFNKLIGEIPKGGIF
I4DUG2________________LNLSHNAFEGPIPDSLSKLQNLHEMDLSANFLSGSIPMSLGRLKALNYMNVSFNNLSGQIPGGGLF

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain