SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene119476

Length: 543 nt

UniGene Fasta

>sp_v3.0_unigene119476
GGTACGACGATACCCTTTCCGTCTCTTACCTGCCCTTCCGCCGAAGCGTGTGCAGCCCGACGCTGCATTCATTGAGCAACGAAGGAAAGGTCTTGCTAGGTTTCTGAACGCTGTGATAAACCATCCGGTAATCAAGGAGGACGGTGTTCTTGCGACCTTCCTTTCAGAACCTTCCTTCGAGAATTGGCGGAAACACACTGCAGTGTCTCTCGAGGAAGAATCTGCAAGCAAACGAATCGATAGGATAGAAGAAATCACTGTCCCAAGTGACCTTGAAGAGAAGCTTGCTTCCGTGCGGGGGAAGATCAATCCGTTAATAGAGCAGTGGCAGAGAATATGTGTGTTAACTGAGCGCATAGTAAAGAGACGCGAATCAGCTGCGGCAGATCTAGCGCGGCTGACCAATGTGCTGAGGGCCGTCGTTGAAGTGAACGGACGGTGCTGGAGGGGGGATGAGTGCGAGCTGTGTGACGGCGTAATACAGGGTATTGGACACGTCGCTTCTCATACGCAACAGCAGTCTGATTTACTGGAACAACGGAC

Ace file of the UniGene sp_v3.0_unigene119476

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	protein-vacuolar targeting-related protein [Cryptococcus neoformans var. neoformans JEC21] ref\|XP_774961.1\| hypothetical protein CNBF1250 [Cryptococcus neoformans var. neoformans B-3501A] sp\|P0CR59.1\|MVP1_CRYNB RecName: Full=Sorting nexin MVP1 sp\|P0CR58.1	-	-	7.0e-33	40%
FL-Next	tr=Putative uncharacterized protein; Phytophthora infestans (strain T30-4) (Potato late blight fungus).	-	-	0.0	40%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: D0MU29

Fln msg: Distance to subject end: 159 aas, your sequence is shorter than subject: 180 - 443

Fln protein: VRRYPFRLLPALPPKRVQPDAAFIEQRRKGLARFLNAVINHPVIKEDGVLATFLSEPSFENWRKHTAVSLEEESASKRIDRIEEITVPSDLEEKLASVRGKINPLIEQWQRICVLTERIVKRRESAAADLARLTNVLRAVVEVNGRCWRGDECELCDGVIQGIGHVASHTQQQSDLLEQR

Protein Length: 181

Fln nts: GGTACGACGATACCCTTTCCGTCTCTTACCTGCCCTTCCGCCGAAGCGTGTGCAGCCCGACGCTGCATTCATTGAGCAACGAAGGAAAGGTCTTGCTAGGTTTCTGAACGCTGTGATAAACCATCCGGTAATCAAGGAGGACGGTGTTCTTGCGACCTTCCTTTCAGAACCTTCCTTCGAGAATTGGCGGAAACACACTGCAGTGTCTCTCGAGGAAGAATCTGCAAGCAAACGAATCGATAGGATAGAAGAAATCACTGTCCCAAGTGACCTTGAAGAGAAGCTTGCTTCCGTGCGGGGGAAGATCAATCCGTTAATAGAGCAGTGGCAGAGAATATGTGTGTTAACTGAGCGCATAGTAAAGAGACGCGAATCAGCTGCGGCAGATCTAGCGCGGCTGACCAATGTGCTGAGGGCCGTCGTTGAAGTGAACGGACGGTGCTGGAGGGGGGATGAGTGCGAGCTGTGTGACGGCGTAATACAGGGTATTGGACACGTCGCTTCTCATACGCAACAGCAGTCTGATTTACTGGAACAACGGAC

Fln Alignment:

AllPine_a_c54974___RYPFRLLPALPPKR----VQPDAAFIEQRRKGLARFLNAVINHPVIKEDGVLATFLSEP----SFENWRKHTAV
D0MU29________________RYIGLLIPSLPEKTTTAAVLMSSAFMQSRMRGLQRFLNDIMKSPYLRSDAAVASFLGEPGDEATWEMMRKNTAV

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain