SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene119345

Length: 495 nt

UniGene Fasta

>sp_v3.0_unigene119345
GGCGCTTGGTCGTCATATTGACCACCATCATGTCCAGTCCAGCGGAACAACAGCCTCTTCTGGCGTACCCCTACTTTGAGGGACACGCCCACCCTGAGCAGCCCAAAAGGACCCTCACAGTCTGGCGCGAGAACGTTGCTCGCGTTTTAGAGTCCCAGGCCTTTCACACCTTCGTCATTGCATTGATCGTAATCGATGCCACTTGCGTCCTCGCTGACCTTGGATATACCGTTTTGTCCGACTCATGCACTCCATCGGACGAAGGCCCCGCATGGCTCGAAGTTCTAGCAAACATATCACTCGTCATCACCACGCTCTTTCTTATTGAAATACCAATCACTCTCTGGGCTTCTGGATTCCGCTTCTATATCCCATTCTCGGGCGTGCCCCATGCGGCGCTACATCTCTTTGATGTTGCGATCATCGTCACGACTTTCATTCTCGAATTCGTCCTCAAGGGACGCCAACGTGAATTGGCTGGACTTCTCATCACTC

Ace file of the UniGene sp_v3.0_unigene119345

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	voltage-gated hydrogen channel 1 [Gallus gallus] sp\|Q5F4C0.1\|HVCN1_CHICK RecName: Full=Voltage-gated hydrogen channel 1; AltName: Full=Hydrogen voltage-gated channel 1; Short=HV1 emb\|CAH65014.1\| hypothetical protein RCJMB04_1c7 [Gallus gallus]	-	-	1.0e-05	26%
FL-Next	tr=Putative uncharacterized protein; Chlorella variabilis (Green alga).	-	-	0.0	37%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: E1ZKX0

Fln msg: Distance to subject end: 204 aas, your sequence is shorter than subject: 164 - 480

Fln protein: RLVVILTTIMSSPAEQQPLLAYPYFEGHAHPEQPKRTLTVWRENVARVLESQAFHTFVIALIVIDATCVLADLGYTVLSDSCTPSDEGPAWLEVLANISLVITTLFLIEIPITLWASGFRFYIPFSGVPHAALHLFDVAIIVTTFILEFVLKGRQRELAGLLIT

Protein Length: 165

Fln nts: GGCGCTTGGTCGTCATATTGACCACCATCATGTCCAGTCCAGCGGAACAACAGCCTCTTCTGGCGTACCCCTACTTTGAGGGACACGCCCACCCTGAGCAGCCCAAAAGGACCCTCACAGTCTGGCGCGAGAACGTTGCTCGCGTTTTAGAGTCCCAGGCCTTTCACACCTTCGTCATTGCATTGATCGTAATCGATGCCACTTGCGTCCTCGCTGACCTTGGATATACCGTTTTGTCCGACTCATGCACTCCATCGGACGAAGGCCCCGCATGGCTCGAAGTTCTAGCAAACATATCACTCGTCATCACCACGCTCTTTCTTATTGAAATACCAATCACTCTCTGGGCTTCTGGATTCCGCTTCTATATCCCATTCTCGGGCGTGCCCCATGCGGCGCTACATCTCTTTGATGTTGCGATCATCGTCACGACTTTCATTCTCGAATTCGTCCTCAAGGGACGCCAACGTGAATTGGCTGGACTTCTCATCACTC

Fln Alignment:

AllPine_a_c54803___VARVLESQAFHTFVIALIVIDATCVLADLGYTVLSDSCTPSDEGPAWL-----EVLANISLVITTLFLIEIPITLWASGFRFYIPFSGVPHAALHLFDVAIIVTTFILEFVLKGRQRELAGLLI
E1ZKX0________________MAEVLESREAHYAVIGLVLLDLAIVLTEL---VLS-SFYPSPELAPHLVHVAEEALSYTSIGILAMFNAELLAKLLVFGFKYFT------HSSWHMFDAVIVVISFTLELSLRGVAQEVASLLI

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain