SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene119035

Length: 162 nt

UniGene Fasta

>sp_v3.0_unigene119035
CCGTGTCAAGCTGGGCACACTCACAGCCCCAGAGATGGACTACAGCCACGAGGAGAAGGGCGATGCCCTGCACGCCATGGAGTTCGCCCTCGCCATGGAGCGCCTGAACCTGCAGTACCTGTACAACCTGCATGAGGTGGCCGACAAGCACGGGGACGGGCA

Ace file of the UniGene sp_v3.0_unigene119035

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Pre-apoferritin n=1 Tax=Chlamydomonas reinhardtii RepID=Q8LRU1_CHLRE	-	-	4.0e-10	59%
FL-Next	sp=Ferritin; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	46%

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT3G56090.1	ATFER3, FER3 ferritin 3 chr3:20814350-20815984 REVERSE LENGTH=259	8.0e-12	51%
RefSeq	Arabidopsis thaliana	NP_191168.1	ferritin 3 [Arabidopsis thaliana]	1.0e-11	51%
RefSeq	Populus trichocarpa	XP_002315139.1	predicted protein [Populus trichocarpa]	3.0e-11	50%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LPN3

Fln msg: Distance to subject end: 55 aas, your sequence is shorter than subject: 53 - 266

Fln protein: RVKLGTLTAPEMDYSHEEKGDALHAMEFALAMERLNLQYLYNLHEVADKHGDG

Protein Length: 54

Fln nts: CCGTGTCAAGCTGGGCACACTCACAGCCCCAGAGATGGACTACAGCCACGAGGAGAAGGGCGATGCCCTGCACGCCATGGAGTTCGCCCTCGCCATGGAGCGCCTGAACCTGCAGTACCTGTACAACCTGCATGAGGTGGCCGACAAGCACGGGGACGGGCA

Fln Alignment:

AllPine_a_c54415___RVKLGTLTAPEMDYSHEEKGDALHAMEFALAMERLNLQYLYNLHEVADKHGD
B8LPN3________________KVKFQSILMPLMEFDHPEKGDALYAMELALSLEKLTNEKLLSLHSVAQQCND

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain