SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene118568

Length: 125 nt

UniGene Fasta

>sp_v3.0_unigene118568
GGTGGTGTGGTTATGGGCATCTCACATTCCTTGTTTGAGCAAGAACTTCAAAGTTTAAAGGCTGCAAAGGGAGTGACACTTGATACAGACTTAACTGCAGATGATCTGAAACAGCTGGTAGTTAA

Ace file of the UniGene sp_v3.0_unigene118568

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	2.0e-05	68%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	95%
Sma3	Pyruvate, phosphate dikinase, chloroplastic	-	-	3.314e-12	-

Source	ECs	Term	Type	e value	Identity
Sma3	Pyruvate, phosphate dikinase.	EC:2.7.9.1	-	8.757e-14	-

Source	KEGGs	Term	e value	Identity
Sma3	Pyruvate metabolism	00620	8.757e-14	%
Sma3	Carbon fixation in photosynthetic organisms	00710	8.757e-14	%
Sma3	Metabolic pathways	01100	8.757e-14	%

Source	Gene names
Sma3	PDK; PHYPADRAFT_177398; POPTRDRAFT_565688; PPD; PPDK; RCOM_0678910;

Source	GOs	Term	Type	Identity
Sma3	chloroplast	GO:0009507	Cellular Component	-
Sma3	magnesium ion binding	GO:0000287	Molecular Function	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	kinase activity	GO:0016301	Molecular Function	-
Sma3	pyruvate, phosphate dikinase activity	GO:0050242	Molecular Function	-
Sma3	photosynthesis	GO:0015979	Biological Process	-
Sma3	phosphorylation	GO:0016310	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	PEP-utilising enzyme, C-terminal	IPR000121	-	-
Sma3	Pyruvate phosphate dikinase, PEP/pyruvate-binding	IPR002192	-	-
Sma3	PEP-utilising enzyme, mobile domain	IPR008279	-	-
Sma3	Pyruvate, phosphate dikinase	IPR010121	-	-
Sma3	ATP-grasp fold, subdomain 1	IPR013815	-	-
Sma3	ATP-grasp fold, subdomain 2	IPR013816	-	-
Sma3	Pyruvate/Phosphoenolpyruvate kinase	IPR015813	-	-
Sma3	PEP-utilising enzyme, active site	IPR018274	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LLH9

Fln msg: Distance to subject end: 690 aas, your sequence is shorter than subject: 41 - 963

Fln protein: GGVVMGISHSLFEQELQSLKAAKGVTLDTDLTADDLKQLVV

Protein Length: 42

Fln nts: GGTGGTGTGGTTATGGGCATCTCACATTCCTTGTTTGAGCAAGAACTTCAAAGTTTAAAGGCTGCAAAGGGAGTGACACTTGATACAGACTTAACTGCAGATGATCTGAAACAGCTGGTAGTTAA

Fln Alignment:

AllPine_a_c53847___GGVVMGISHSLFEQELQSLKAAKGVXXXXXXXXXXXKQLVV
B8LLH9________________GGVVMGISHSLFEQELKSLKAANGVTLDTDLTADDLKQLVV

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain