UniGene Name: sp_v3.0_unigene116194
Length: 229 nt
UniGene Fasta |
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>sp_v3.0_unigene116194
T |
Ace file of the UniGene sp_v3.0_unigene116194 |
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Annotations |
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Source | Descriptions | Term | Type | e value | Identity |
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AutoFact | putative copper-transporting ATPase PAA1 [Arabidopsis thaliana] gb|AEE86241.1| putative copper-transporting ATPase PAA1 [Arabidopsis thaliana] | - | - | 1.0e-16 | 61% |
FL-Next | sp=Copper-transporting ATPase PAA1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). | - | - | 0.0 | 70% |
Source | ECs | Term | Type | e value | Identity |
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Sma3 | Copper-exporting ATPase. | EC:3.6.3.4 | - | 2.993e-07 | - |
Source | Gene names |
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Sma3 | At4g33520; At4g33525; F17M5.280; PAA1; PHYPADRAFT_117222; PHYPADRAFT_215914; RCOM_0460580; T16L1.10; |
Source | GOs | Term | Type | e value | Identity |
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Sma3 | chloroplast stroma | GO:0009570 | Cellular Component | 0.0 | - |
Sma3 | chloroplast envelope | GO:0009941 | Cellular Component | 0.0 | - |
Sma3 | integral to membrane | GO:0016021 | Cellular Component | 0.0 | - |
Sma3 | magnesium ion binding | GO:0000287 | Molecular Function | 0.0 | - |
Sma3 | copper-exporting ATPase activity | GO:0004008 | Molecular Function | 0.0 | - |
Sma3 | copper ion binding | GO:0005507 | Molecular Function | 0.0 | - |
Sma3 | ATP binding | GO:0005524 | Molecular Function | 0.0 | - |
Sma3 | metal ion binding | GO:0046872 | Molecular Function | 0.0 | - |
Sma3 | ATP biosynthetic process | GO:0006754 | Biological Process | 0.0 | - |
Sma3 | copper ion transport | GO:0006825 | Biological Process | 0.0 | - |
Sma3 | photosynthetic electron transport chain | GO:0009767 | Biological Process | 0.0 | - |
Sma3 | metal ion transport | GO:0030001 | Biological Process | 0.0 | - |
Source | InterPros | Term | Type | e value | Identity |
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Sma3 | Cof protein | IPR000150 | - | 0.0 | - |
Sma3 | ATPase, P-type, H+ transporting proton pump | IPR000695 | - | 0.0 | - |
Sma3 | IPR001756 | - | 0.0 | - | |
Sma3 | ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter | IPR001757 | - | 0.0 | - |
Sma3 | Haloacid dehalogenase-like hydrolase | IPR005834 | - | 0.0 | - |
Sma3 | Heavy metal-associated domain, HMA | IPR006121 | - | 0.0 | - |
Sma3 | ATPase, P type, cation/copper-transporter | IPR006403 | - | 0.0 | - |
Sma3 | ATPase, P-type, heavy metal translocating | IPR006416 | - | 0.0 | - |
Sma3 | ATPase, P-type, ATPase-associated domain | IPR008250 | - | 0.0 | - |
Sma3 | Heavy-metal-associated, conserved site | IPR017969 | - | 0.0 | - |
Sma3 | ATPase, P-type phosphorylation site | IPR018303 | - | 0.0 | - |
Source | Species | ID | Description | e value | Identity |
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ATG | Arabidoptis thaliana | AT4G33520.2 | PAA1, HMA6 P-type ATP-ase 1 chr4:16118993-16125849 FORWARD LENGTH=949 | 9.0e-19 | 61% |
RefSeq | Arabidopsis thaliana | NP_974676.1 | putative copper-transporting ATPase PAA1 [Arabidopsis thaliana] | 1.0e-18 | 61% |
RefSeq | Populus trichocarpa | XP_002299685.1 | heavy metal ATPase, partial [Populus trichocarpa] | 2.0e-17 | 55% |
Full-Lengther Next Prediction |
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Fln status: Internal
Fln database: sp_plants
Fln subject: Q9SZC9
Fln msg: Overlapping hits, possible frame ERROR between 73 and 66, Distance to subject end: 512 aas, your sequence is shorter than subject: 76 - 949
Fln protein:
L
Protein Length:
77
Fln nts:
T
Fln Alignment:
AllPine_a_c51016___LEERAKLKATSDMTALLNFLPxxxRLLLGSSIEGEPPTVEIPCSSLSMGDSVVVLPGEHIPADGIVNGGRSTVDE
Q9SZC9________________LEQRAKIKATSDMTGLLSVLPxxxRLLLDGDLQNS--TVEVPCNSLSVGDLVVILPGDRVPADGVVKSGRSTIDE
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain