SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene112522

Length: 176 nt

UniGene Fasta

>sp_v3.0_unigene112522
GAAAGACGCACTGTTATTGAGGTACTCGAAGACTTTCCGTCTGTGCATCTGCCCCTGGAATGGCTCTTGCAATTAGTTCCTCGACTTCAAACACGGATGTTCTCCATCTCTTCTTCACTTTTAGCTCACCCTAACCAGGTTCACATTACAGTAGCTGTGGTATCATGGATGACTCC

Ace file of the UniGene sp_v3.0_unigene112522

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	NADPH fad oxidoreductase, putative n=1 Tax=Ricinus communis RepID=B9SYB5_RICCO	-	-	4.0e-18	77%
FL-Next	sp=NADPH--cytochrome P450 reductase; Taxus cuspidata (Japanese yew).	-	-	0.0	40%

Source	Gene names
Sma3	ATR3; At3g02280; B1060H01.9; F14P3.7; GSVIVT00038202001; MtrDRAFT_AC148995g35v2; OSJNBb0036G09.20; Os01g0733600; OsI_03638; OsJ_03361; PHYPADRAFT_186100; POPTRDRAFT_714013; RCOM_0760860;

Source	GOs	Term	Type	Identity
Sma3	iron ion binding	GO:0005506	Molecular Function	-
Sma3	electron carrier activity	GO:0009055	Molecular Function	-
Sma3	FMN binding	GO:0010181	Molecular Function	-
Sma3	oxidoreductase activity	GO:0016491	Molecular Function	-

Source	InterPros	Term	Type	Identity
Sma3	Flavodoxin	IPR001094	-	-
Sma3	Oxidoreductase FAD/NAD(P)-binding	IPR001433	-	-
Sma3	Flavoprotein pyridine nucleotide cytochrome reductase	IPR001709	-	-
Sma3	FAD-binding, type 1	IPR003097	-	-
Sma3	Flavodoxin/nitric oxide synthase	IPR008254	-	-
Sma3	Ferredoxin reductase-type FAD-binding domain	IPR017927	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT3G02280.1	Flavodoxin family protein chr3:453646-457659 FORWARD LENGTH=623	2.0e-21	67%
RefSeq	Arabidopsis thaliana	NP_186877.2	flavodoxin-like protein [Arabidopsis thaliana]	3.0e-21	67%
RefSeq	Populus trichocarpa	XP_002305157.1	nadph-cytochrome P450 oxydoreductase [Populus trichocarpa]	9.0e-24	77%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: Q5J0E4

Fln msg: Distance to subject end: 195 aas, your sequence is shorter than subject: 58 - 717

Fln protein: ERRTVIEVLEDFPSVHLPLEWLLQLVPRLQTRMFSISSSLLAHPNQVHITVAVVSWMT

Protein Length: 59

Fln nts: GAAAGACGCACTGTTATTGAGGTACTCGAAGACTTTCCGTCTGTGCATCTGCCCCTGGAATGGCTCTTGCAATTAGTTCCTCGACTTCAAACACGGATGTTCTCCATCTCTTCTTCACTTTTAGCTCACCCTAACCAGGTTCACATTACAGTAGCTGTGGTATCATGGATGACTCC

Fln Alignment:

AllPine_a_c46505___RRTVIEVLEDFPSVHLPLE-WLLQLVPRLQTRMFSISSSLLAHPNQVHITVAVV
Q5J0E4________________QRSLLEIMAEFPSAKPPLGVFFAAIAPRLQPRYYSISSSPRFAPSRIHVTCALV

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain