SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene111306

Length: 373 nt

UniGene Fasta

>sp_v3.0_unigene111306
GGCAGCTCTGTCTGCTTGCTTATGGGTTCTTCTCAAAATTGCGACGCTCATATGGTGGAAACCTCTACAAATCAAGAGGTGCTTTGAATTGCAAGGAATCAGAGGACCTCCCCACCGGCTACTCAGTGGAAATGCTGCTGATATTGCACGAATGGTCACCCAGTCAAAGTCCACAGCCATGCCATGGTCACATGACATACTCGCTCGAGTTCTTCCATTTTTTCATCAGTGGACCAAAACATATGGTGAACAATTTATCTTTTGGTTTGGTCCGAAAGCCACGCTGACTGTTCCTTACCCTGAGCTTATTAAGGAGATATTGTCCAACAAGTTTGAGCACTATGAAAAGGGGTCTGGTAATCCCCTTGCAAGG

Ace file of the UniGene sp_v3.0_unigene111306

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	cytochrome P450 enzyme [Pisum sativum]	-	-	2.0e-27	47%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	66%

Source	Gene names
Sma3	At2g26710; CYP734A; CYP734A10; POPTRDRAFT_100601; RCOM_0220560;

Source	GOs	Term	Type	Identity
Sma3	monooxygenase activity	GO:0004497	Molecular Function	-
Sma3	iron ion binding	GO:0005506	Molecular Function	-
Sma3	steroid hydroxylase activity	GO:0008395	Molecular Function	-
Sma3	electron carrier activity	GO:0009055	Molecular Function	-
Sma3	heme binding	GO:0020037	Molecular Function	-
Sma3	brassinosteroid homeostasis	GO:0010268	Biological Process	-
Sma3	brassinosteroid metabolic process	GO:0016131	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Cytochrome P450	IPR001128	-	-
Sma3	Cytochrome P450, E-class, group I	IPR002401	-	-
Sma3	Cytochrome P450, conserved site	IPR017972	-	-
Sma3		IPR017973	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT2G26710.1	BAS1, CYP734A1, CYP72B1 Cytochrome P450 superfamily protein chr2:11380700-11383413 FORWARD LENGTH=520	3.0e-32	47%
RefSeq	Arabidopsis thaliana	NP_180239.1	PHYB activation tagged suppressor 1 protein [Arabidopsis thaliana]	4.0e-32	47%
RefSeq	Populus trichocarpa	XP_002332385.1	cytochrome P450 [Populus trichocarpa]	6.0e-32	47%

Full-Lengther Next Prediction

Fln status: Putative N-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NWW9

Fln msg: Distance to subject end: 384 aas, atg_distance in limit (1-15): atg_distance = 9, W2: There is no M at the beginning, your sequence is shorter than subject: 124 - 517

Fln protein: AALSACLWVLLKIATLIWWKPLQIKRCFELQGIRGPPHRLLSGNAADIARMVTQSKSTAMPWSHDILARVLPFFHQWTKTYGEQFIFWFGPKATLTVPYPELIKEILSNKFEHYEKGSGNPLAR

Protein Length: 125

Fln nts: GGCAGCTCTGTCTGCTTGCTTATGGGTTCTTCTCAAAATTGCGACGCTCATATGGTGGAAACCTCTACAAATCAAGAGGTGCTTTGAATTGCAAGGAATCAGAGGACCTCCCCACCGGCTACTCAGTGGAAATGCTGCTGATATTGCACGAATGGTCACCCAGTCAAAGTCCACAGCCATGCCATGGTCACATGACATACTCGCTCGAGTTCTTCCATTTTTTCATCAGTGGACCAAAACATATGGTGAACAATTTATCTTTTGGTTTGGTCCGAAAGCCACGCTGACTGTTCCTTACCCTGAGCTTATTAAGGAGATATTGTCCAACAAGTTTGAGCACTATGAAAAGGGGTCTGGTAATCCCCTTGCAAGG

Fln Alignment:

AllPine_a_c45014___AALSACL-WVLLKIATLIWWKPLQIKRCFELQGIRGPPHRLLSGNAADIARMVTQSKSTAMPWSHDILARVLPFFHQWTKTYGEQFIFWFGPKATLTVPYPELIKEILSNKFEHYEKGSGNPLAR
A9NWW9________________AAAFGCLGYFVLRIVTVIWWKPLQVKKCFESQGVRGPPYRLLNGNFADMVRMNTQAKSTPIPWSHDIVPRVLPYYHHWTKTYGKDFIYWVGSKPRLNVPHPELIKEILSNKFGHYENISSNPLGR

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain