SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene108801

Length: 604 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v3.0_unigene108801 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Ataxia telangiectasia mutated, putative n=1 Tax=Ricinus communis RepID=B9RB21_RICCO	-	-	0.0	93%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	28%
Sma3	Target of rapamycin kinase	-	-	1.134e-11	-

Source	ECs	Term	Type	e value	Identity
Sma3	Non-specific serine/threonine protein kinase.	EC:2.7.11.1	-	1.204e-06	-

Source	Gene names
Sma3	ATM; ATM1; ATR; ATR1; At1g50030; At3g48190; At5g40820; CHLREDRAFT_176480; CHLREDRAFT_205974; CHLREDRAFT_206149; F2J10.9; GSVIVT00016088001; GSVIVT00036181001; GSVIVT00036461001; LOC_Os03g52794; LOC_Os06g50910; MHK7.5; MICPUCDRAFT_21889; MICPUCDRAFT_28270;

Source	GOs	Term	Type	Identity
Sma3	nucleus	GO:0005634	Cellular Component	-
Sma3	chromosome	GO:0005694	Cellular Component	-
Sma3	DNA binding	GO:0003677	Molecular Function	-
Sma3	protein serine/threonine kinase activity	GO:0004674	Molecular Function	-
Sma3	binding	GO:0005488	Molecular Function	-
Sma3	kinase activity	GO:0016301	Molecular Function	-
Sma3	phosphotransferase activity, alcohol group as acceptor	GO:0016773	Molecular Function	-
Sma3	DNA repair	GO:0006281	Biological Process	-
Sma3	telomere maintenance via telomerase	GO:0007004	Biological Process	-
Sma3	cell cycle	GO:0007049	Biological Process	-
Sma3	meiosis	GO:0007126	Biological Process	-
Sma3	response to aluminum ion	GO:0010044	Biological Process	-
Sma3	response to gamma radiation	GO:0010332	Biological Process	-
Sma3	regulation of telomere maintenance	GO:0032204	Biological Process	-
Sma3	multicellular organism reproduction	GO:0032504	Biological Process	-
Sma3	telomere maintenance in response to DNA damage	GO:0043247	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	GPCR, rhodopsin-like, 7TM	IPR000276	-	-
Sma3	PWWP	IPR000313	-	-
Sma3	HEAT	IPR000357	-	-
Sma3	Phosphatidylinositol 3-/4-kinase, catalytic domain	IPR000403	-	-
Sma3	Ribosomal protein L23/L25, conserved site	IPR001014	-	-
Sma3	WD40 repeat	IPR001680	-	-
Sma3	Carbohydrate/puine kinase, PfkB, conserved site	IPR002173	-	-
Sma3	PIK-related kinase, FAT	IPR003151	-	-
Sma3	PIK-related kinase, FATC	IPR003152	-	-
Sma3	Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain	IPR003661	-	-
Sma3	FKBP12-rapamycin-associated protein, FKBP12-rapamycin-binding	IPR009076	-	-
Sma3	Armadillo-like helical	IPR011989	-	-
Sma3	Tetratricopeptide-like helical	IPR011990	-	-
Sma3	UME	IPR012993	-	-
Sma3	PIK-related kinase	IPR014009	-	-
Sma3	Ataxia-Telangiectasia Mutated	IPR015519	-	-
Sma3	WD40/YVTN repeat-like-containing domain	IPR015943	-	-
Sma3	WD40-repeat-containing domain	IPR017986	-	-
Sma3	Alkaline phosphatase, active site	IPR018299	-	-
Sma3	Cyclic nucleotide-binding, conserved site	IPR018488	-	-
Sma3	Phosphatidylinositol 3/4-kinase, conserved site	IPR018936	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT3G48190.1	ATM, ATATM ataxia-telangiectasia mutated chr3:17797628-17828361 FORWARD LENGTH=3845	93%
RefSeq	Arabidopsis thaliana	NP_190402.6	serine/threonine-protein kinase [Arabidopsis thaliana]	93%
RefSeq	Populus trichocarpa	XP_002322166.1	predicted protein, partial [Populus trichocarpa]	96%

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain