SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene106139

Length: 371 nt

UniGene Fasta

>sp_v3.0_unigene106139
AATGTCATACCATAGCACAGATTTTGAAGTCCACAGACACTGGCTGGCTCTCACTCATTCCCTCCCCCTCAACCAATGGTATTTCGACGAGAGCAGTCCATGGACATTGGATTATCCTCCACTGTTTGCCTTCTTTGAGAAACTCTTATCCCTCTTCGCCGTCCGCGTAGACCCAAAAATCGTAGATCTCATAAATGGACTCAACTATAAGGCTGAAACGGTTGTGGTATTCCAGAGGGTAACCGTCATGCTAGCAGATCTTGTCTTGTATTTTTCTCTCTGGAGATGCTGCAGGAAACTGAGTTTGGAGAAGCAGAGGCTCGTTTACATCTCAATTGTCTGGTCGCCCAGTCTGTTTATCATCGATCACA

Ace file of the UniGene sp_v3.0_unigene106139

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Dolichyl glycosyltransferase, putative n=1 Tax=Ricinus communis RepID=B9S6A4_RICCO	-	-	3.9937e-43	60%
FL-Next	sp=Probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	58%

Source	Gene names
Sma3	At2g44660; F16B22.15; GSVIVT00019014001; MICPUN_58254; PHYPADRAFT_179078; RCOM_0534290;

Source	GOs	Term	Type	Identity
Sma3	endoplasmic reticulum membrane	GO:0005789	Cellular Component	-
Sma3	integral to membrane	GO:0016021	Cellular Component	-
Sma3	transferase activity, transferring glycosyl groups	GO:0016757	Molecular Function	-
Sma3	transferase activity, transferring hexosyl groups	GO:0016758	Molecular Function	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Glycosyl transferase, ALG6/ALG8	IPR004856	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT2G44660.1	ALG6, ALG8 glycosyltransferase family chr2:18420832-18422827 REVERSE LENGTH=506	0.0	58%
RefSeq	Arabidopsis thaliana	NP_181994.5	alpha-1,3-glucosyltransferase [Arabidopsis thaliana]	0.0	58%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: O80505

Fln msg: Distance to subject end: 356 aas, your sequence is shorter than subject: 123 - 506

Fln protein: MSYHSTDFEVHRHWLALTHSLPLNQWYFDESSPWTLDYPPLFAFFEKLLSLFAVRVDPKIVDLINGLNYKAETVVVFQRVTVMLADLVLYFSLWRCCRKLSLEKQRLVYISIVWSPSLFIIDH

Protein Length: 124

Fln nts: AATGTCATACCATAGCACAGATTTTGAAGTCCACAGACACTGGCTGGCTCTCACTCATTCCCTCCCCCTCAACCAATGGTATTTCGACGAGAGCAGTCCATGGACATTGGATTATCCTCCACTGTTTGCCTTCTTTGAGAAACTCTTATCCCTCTTCGCCGTCCGCGTAGACCCAAAAATCGTAGATCTCATAAATGGACTCAACTATAAGGCTGAAACGGTTGTGGTATTCCAGAGGGTAACCGTCATGCTAGCAGATCTTGTCTTGTATTTTTCTCTCTGGAGATGCTGCAGGAAACTGAGTTTGGAGAAGCAGAGGCTCGTTTACATCTCAATTGTCTGGTCGCCCAGTCTGTTTATCATCGATCACA

Fln Alignment:

AllPine_a_c37865___SYHSTDFEVHRHWLALTHSLPLNQWYFDESSPWTLDYPPLFAFFEKLLSLFAVRVDPKIVDLINGLNYKAETVVVFQRVTVMLADLVLYFSLWRCCRKLSLEKQRLVYISIVWSPSLFIIDH
O80505________________SSRSTDFEVHRNWLAITNSLPLTKWYFDETSQWTLDYPPFFAYFERFLSIFARLVDPRIVDLQSGLDYNAESVIYFQRISVIVSDLCLLYGVYRLTRKLEPLKRNLICALVIWSPGLLIVDH

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain