SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene104949

Length: 235 nt

UniGene Fasta

>sp_v3.0_unigene104949
AATGTGTATTTCTTCCCTACTGAACTTCCTTGATGATCTCTGTGAGTTATCAAGGTTCAACATGCTGGAAATTTCATTGCAATCTGTTCTACTGCTACATATGGTAGATATGACAAGAATATTCTCACAATCTAGAATGGAGAAATTTTTCAGTGACATATTAGATTTCATCAGCCGTTGGTTGATTTTGGAAATCCCAAAACATGACACTGAACAAGAGACTGAGTCAAACAGC

Ace file of the UniGene sp_v3.0_unigene104949

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Putative uncharacterized protein; Ricinus communis (Castor bean).	-	-	0.0	58%

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT3G27670.1	RST1 ARM repeat superfamily protein chr3:10245338-10253158 FORWARD LENGTH=1841	4.0e-11	59%
RefSeq	Arabidopsis thaliana	NP_189404.2	protein resurrection1 [Arabidopsis thaliana]	5.0e-11	59%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: B9S637

Fln msg: Distance to subject end: 283 aas, your sequence is shorter than subject: 78 - 1858

Fln protein: MCISSLLNFLDDLCELSRFNMLEISLQSVLLLHMVDMTRIFSQSRMEKFFSDILDFISRWLILEIPKHDTEQETESNS

Protein Length: 79

Fln nts: AATGTGTATTTCTTCCCTACTGAACTTCCTTGATGATCTCTGTGAGTTATCAAGGTTCAACATGCTGGAAATTTCATTGCAATCTGTTCTACTGCTACATATGGTAGATATGACAAGAATATTCTCACAATCTAGAATGGAGAAATTTTTCAGTGACATATTAGATTTCATCAGCCGTTGGTTGATTTTGGAAATCCCAAAACATGACACTGAACAAGAGACTGAGTCAAACAGC

Fln Alignment:

AllPine_a_c36207___LLNFLDDLCELSRFNMLEISLQSVLLLHMVDMTRIFSQSRMEKFFSDILDFIS
B9S637________________LLTFLDELSDLSRFRTLELNLQSCLLAHLAGLTKIFSGSRLEKLFDDIAEFFS

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain