SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene102973

Length: 665 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v3.0_unigene102973 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	sp=Pentatricopeptide repeat-containing protein At2g32230, mitochondrial; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	60%
Sma3	Multidrug resistance pump, putative	-	-	3.964e-09	-

Source	Gene names
Sma3	At2g32230; At4g21900; F22D22.2; GSVIVT00016721001; GSVIVT00025789001; GSVIVT00031551001; GSVIVT00035352001; MICPUN_102553; OJ1656_A11.5; OSJNBb0020J19.15; Os01g0968000; Os02g0273800; Os04g0692500; OsI_06719; OsI_18054; OsJ_04901; OsJ_06217; OsJ_16752; P04

Source	GOs	Term	Type	Identity
Sma3	mitochondrion	GO:0005739	Cellular Component	-
Sma3	membrane	GO:0016020	Cellular Component	-
Sma3	drug transmembrane transporter activity	GO:0015238	Molecular Function	-
Sma3	antiporter activity	GO:0015297	Molecular Function	-
Sma3	drug transmembrane transport	GO:0006855	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Multi antimicrobial extrusion protein	IPR002528	-	-
Sma3	Pentatricopeptide repeat	IPR002885	-	-
Sma3	Putative S-adenosyl-L-methionine-dependent methyltransferase	IPR004159	-	-
Sma3	Carbohydrate kinase, FGGY, conserved site	IPR018483	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT2G32230.1	PRORP1 proteinaceous RNase P 1 chr2:13679608-13681756 REVERSE LENGTH=572	60%
RefSeq	Arabidopsis thaliana	NP_850186.1	proteinaceous RNase P 1 [Arabidopsis thaliana]	60%
RefSeq	Populus trichocarpa	XP_002305261.1	predicted protein [Populus trichocarpa]	62%

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain