SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene100884

Length: 234 nt

UniGene Fasta

>sp_v3.0_unigene100884
CGTCGTGACCTTGGCTGTCACTCATCTTTTGCACAGATGAATAATGTGTCGAACCCTAGTCAAAACCCCACGCACACGAGGTCGATCTCGCAGCCCGCATTCTTGCAGGGGAATCCCTTTGGGGAGTCCAACATCAATTTGCCTCCCTTGACCCCGGCGTTTTCTTTAAAGCGAGAAACGGCAGCGTCGCCTTCGCTGTCAGACCCGGACGTGACCATGGACGAGCATCCCATT

Ace file of the UniGene sp_v3.0_unigene100884

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	9.0e-31	94%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	94%

Source	InterPros	Term	Type	e value	Identity
Sma3	Basic-leucine zipper domain	IPR004827	-	0.0	-
Sma3	bZIP transcription factor, bZIP-1	IPR011616	-	0.0	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LQ18

Fln msg: Distance to subject end: 440 aas, your sequence is shorter than subject: 78 - 585

Fln protein: RRDLGCHSSFAQMNNVSNPSQNPTHTRSISQPAFLQGNPFGESNINLPPLTPAFSLKRETAASPSLSDPDVTMDEHPI

Protein Length: 79

Fln nts: CGTCGTGACCTTGGCTGTCACTCATCTTTTGCACAGATGAATAATGTGTCGAACCCTAGTCAAAACCCCACGCACACGAGGTCGATCTCGCAGCCCGCATTCTTGCAGGGGAATCCCTTTGGGGAGTCCAACATCAATTTGCCTCCCTTGACCCCGGCGTTTTCTTTAAAGCGAGAAACGGCAGCGTCGCCTTCGCTGTCAGACCCGGACGTGACCATGGACGAGCATCCCATT

Fln Alignment:

AllPine_a_c26809___SFAQMNNVSNPSQNPTHTRSISQPAFLQGNPFGESNINLPPLTP-AFSLKRETAASPSLSDPDVTMDEHPI
B8LQ18________________SFAQMNNVSNPSQNPTHSRSISQPAFLQGNPFGESNSNLPPLTPTTFSLKRETAASPSLSDPDVTMDEHPI

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain