SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene100825

Length: 628 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene100825

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Lipoyltransferase n=2 Tax=Zea mays RepID=B6U7E2_MAIZE	-	-	1.0e-31	47%
FL-Next	sp=Plastidial lipoyltransferase 2; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	56%

Source	ECs	Term	Type	e value	Identity
Sma3	Transferases, Acyltransferases, Transferring groups other than amino-acyl groups.	EC:2.3.1.-	-	3.747e-06	-

Source	KEGGs	Term	e value	Identity
Sma3	Fatty acid biosynthesis	00061	3.747e-06	%
Sma3	Tetracycline biosynthesis	00253	3.747e-06	%
Sma3	Lysine degradation	00310	3.747e-06	%
Sma3	Arginine and proline metabolism	00330	3.747e-06	%
Sma3	Histidine metabolism	00340	3.747e-06	%
Sma3	Tyrosine metabolism	00350	3.747e-06	%
Sma3	Benzoate degradation	00362	3.747e-06	%
Sma3	Lipopolysaccharide biosynthesis	00540	3.747e-06	%
Sma3	Glycerophospholipid metabolism	00564	3.747e-06	%
Sma3	Ether lipid metabolism	00565	3.747e-06	%
Sma3	Glycosphingolipid biosynthesis - ganglio series	00604	3.747e-06	%
Sma3	Toluene degradation	00623	3.747e-06	%
Sma3	Naphthalene degradation	00626	3.747e-06	%
Sma3	Aminobenzoate degradation	00627	3.747e-06	%
Sma3	Ethylbenzene degradation	00642	3.747e-06	%
Sma3	Butanoate metabolism	00650	3.747e-06	%
Sma3	Methane metabolism	00680	3.747e-06	%
Sma3	Limonene and pinene degradation	00903	3.747e-06	%
Sma3	Diterpenoid biosynthesis	00904	3.747e-06	%
Sma3	Carotenoid biosynthesis	00906	3.747e-06	%
Sma3	Anthocyanin biosynthesis	00942	3.747e-06	%
Sma3	Stilbenoid, diarylheptanoid and gingerol biosynthesis	00945	3.747e-06	%
Sma3	Isoquinoline alkaloid biosynthesis	00950	3.747e-06	%
Sma3	Tropane, piperidine and pyridine alkaloid biosynthesis	00960	3.747e-06	%
Sma3	Betalain biosynthesis	00965	3.747e-06	%
Sma3	Biosynthesis of unsaturated fatty acids	01040	3.747e-06	%
Sma3	Biosynthesis of type II polyketide backbone	01056	3.747e-06	%
Sma3	Biosynthesis of terpenoids and steroids	01062	3.747e-06	%
Sma3	Metabolic pathways	01100	3.747e-06	%
Sma3	Biosynthesis of secondary metabolites	01110	3.747e-06	%

Source	Gene names
Sma3	AT4g31050; At1g47575; At4g31050; CHLREDRAFT_50452; F16N3.14; F6I18.40; GSVIVT00023636001; LIP2p; LIPB; MICPUCDRAFT_70185; PHYPADRAFT_17195; RCOM_0251400;

Source	GOs	Term	Type	Identity
Sma3	chloroplast	GO:0009507	Cellular Component	-
Sma3	catalytic activity	GO:0003824	Molecular Function	-
Sma3		GO:0008415	Molecular Function	-
Sma3	protein modification process	GO:0006464	Biological Process	-
Sma3	lipoate biosynthetic process	GO:0009107	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Octanoyltransferase	IPR000544	-	0.0	-
Sma3	Biotin/lipoate A/B protein ligase	IPR004143	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT4G31050.1	Biotin/lipoate A/B protein ligase family chr4:15114345-15115443 FORWARD LENGTH=278	7.0e-24	56%
RefSeq	Arabidopsis thaliana	NP_567866.1	Plastidial lipoyltransferase 2 [Arabidopsis thaliana]	9.0e-24	56%
RefSeq	Populus trichocarpa	XP_002302455.1	predicted protein [Populus trichocarpa]	2.0e-20	52%

Full-Lengther Next Prediction

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain