SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene99125

Length: 152 nt

UniGene Fasta

>sp_v3.0_unigene99125
AATGTCCCTGTTGCATATCCTATAACAAAAGATAACCTCAACTATACACCTCTGGCAGTGGGGGCAGTATTCGTTTTAACTTGCGGTAGTTGGCTTCTACATGCAAGATATTGGTTCAAGGGACCTGTGGCAAATATTAAAGTGTAAGGAAT

Ace file of the UniGene sp_v3.0_unigene99125

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Putative amino acid permease n=6 Tax=Triticeae RepID=B2ZGJ4_AEGTA	-	-	1.0e-13	67%
FL-Next	sp=Amino-acid permease BAT1 homolog; Oryza sativa subsp. japonica (Rice).	-	-	0.0	63%

Source	GOs	Term	Type	Identity
Sma3	membrane	GO:0016020	Cellular Component	-
Sma3	amino acid transmembrane transporter activity	GO:0015171	Molecular Function	-
Sma3	amino acid transport	GO:0006865	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Amino acid/polyamine transporter I	IPR002293	-	0.0	-
Sma3	Amino acid permease domain	IPR004841	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT2G01170.1	BAT1 bidirectional amino acid transporter 1 chr2:102364-104462 REVERSE LENGTH=516	4.0e-13	54%
RefSeq	Arabidopsis thaliana	NP_973387.1	bidirectional amino acid transporter 1 [Arabidopsis thaliana]	4.0e-13	54%
RefSeq	Populus trichocarpa	XP_002315914.1	amino acid transporter [Populus trichocarpa]	6.0e-16	57%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: sp_plants

Fln subject: B9EXZ6

Fln msg: your sequence is shorter than subject: 49 - 520

Fln protein: NVPVAYPITKDNLNYTPLAVGAVFVLTCGSWLLHARYWFKGPVANIKV*

Protein Length: 50

Fln nts: AATGTCCCTGTTGCATATCCTATAACAAAAGATAACCTCAACTATACACCTCTGGCAGTGGGGGCAGTATTCGTTTTAACTTGCGGTAGTTGGCTTCTACATGCAAGATATTGGTTCAAGGGACCTGTGGCAAATATTAAAGTGTAA___GGAAT

Fln Alignment:

AllPine_a_c21145___NVPVAYPITKDNLNYTPLAVGAVFVLTCGSWLLHARYWFKGPVANI
B9EXZ6_______________SLPVSYPVTKDTLNYTPVAVGGLFLLVLSSWLLSARHWFKGPITNL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain