SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene97712

Length: 798 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene97712

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Transcription cofactor, putative n=1 Tax=Ricinus communis RepID=B9RHR9_RICCO	-	-	0.0	72%
FL-Next	sp=Probable histone acetyltransferase HAC-like 1; Oryza sativa subsp. japonica (Rice).	-	-	0.0	84%
Sma3	Histone acetyltransferase	-	-	7.131e-14	-

Source	ECs	Term	Type	e value	Identity
Sma3	Histone acetyltransferase.	EC:2.3.1.48	-	1.143e-18	-

Source	Gene names
Sma3	At1g16710; At1g55970; At1g79000; At3g12980; CHLREDRAFT_145462; F14J16.27; F17F16.8; F17F16_21; GSVIVT00029724001; GSVIVT00038188001; HAC1; HAC12; HAC1501; HAC1502; HAC3501; HAC4; HAC5; HAC901; HAC902; HAC903; Loc_Os01g14370; Loc_Os02g04490; Loc_Os06g49130

Source	GOs	Term	Type	Identity
Sma3	nucleus	GO:0005634	Cellular Component	-
Sma3	transcription coactivator activity	GO:0003713	Molecular Function	-
Sma3	histone acetyltransferase activity	GO:0004402	Molecular Function	-
Sma3		GO:0004406	Molecular Function	-
Sma3	zinc ion binding	GO:0008270	Molecular Function	-
Sma3	regulation of transcription, DNA-dependent	GO:0006355	Biological Process	-
Sma3	protein acetylation	GO:0006473	Biological Process	-
Sma3	flower development	GO:0009908	Biological Process	-
Sma3	chromatin modification	GO:0016568	Biological Process	-
Sma3		GO:0045449	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Zinc finger, TAZ-type	IPR000197	-	-
Sma3	Zinc finger, ZZ-type	IPR000433	-	-
Sma3	Zinc finger, PHD-type	IPR001965	-	-
Sma3	Zinc finger, C2H2	IPR007087	-	-
Sma3		IPR009255	-	-
Sma3	Multihaem cytochrome	IPR011031	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT1G79000.2	HAC1 histone acetyltransferase of the CBP family 1 chr1:29716639-29723984 REVERSE LENGTH=1741	66%
RefSeq	Arabidopsis thaliana	NP_001185433.1	E1A/CREB-binding protein [Arabidopsis thaliana]	66%
RefSeq	Populus trichocarpa	XP_002330477.1	histone acetyltransferase [Populus trichocarpa]	71%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: Q6YXY2

Fln msg: Separated hits, possible frame ERROR between 101 and 104, and overlapping frame ERROR between 163 and 160, Distance to subject end: 430 aas, your sequence is shorter than subject: 266 - 1668

Fln protein: RPWRITMNENSCQLCAVEKLTFDPPPVYCTPCxxRIKRNAQFYTIGAGDTRxxxxIPCYNDIRGDTVRVDGLTIQKLRLEKRRNDEETEEAWVQCDKCELWQHQVCALFNGRRNEGGQAEYTCPNCYTSDIERGERIPLPQSAVLGAKDLPKSYMSDHIEQRLFRRLKQEKQERARALGKSYDEVPGAEALVVRVVSSVDKKLEVKQRFLGIFQHEDYPTEYPYKSKG*SSCAHPNQRRVYLSYLDSVKYFRPDVKTVTGEALRTF

Protein Length: 267

Fln nts: TCAGGCCATGGAGAATAACTATGAATGAGAATTCATGTCAGTTATGTGCAGTAGAGAAGCTTACTTTTGACCCACCACCTGTGTATTGCACACCATGTGGxxxTCGCATCAAGCGCAATGCACAATTTTACACTATTGGAGCTGGGGATACGAGACAxxxxxxxxxCATACCTTGTTATAATGATATTCGAGGGGATACAGTCCGTGTGGATGGATTGACAATTCAGAAGTTAAGGCTTGAGAAGAGGAGAAATGATGAAGAAACTGAAGAAGCATGGGTGCAATGTGATAAATGTGAACTTTGGCAACATCAAGTATGTGCTCTGTTCAATGGTAGAAGGAATGAAGGTGGGCAGGCAGAGTATACATGTCCTAATTGCTACACATCAGACATAGAGAGAGGTGAGCGGATACCATTGCCACAGAGTGCTGTTCTTGGTGCAAAAGATTTACCAAAGTCGTACATGAGTGATCATATTGAGCAAAGGCTTTTTAGAAGGCTGAAGCAGGAGAAACAGGAAAGAGCAAGAGCTTTAGGCAAGAGCTATGATGAGGTGCCAGGAGCTGAAGCCCTTGTTGTGAGAGTAGTGTCTTCTGTAGATAAAAAATTAGAAGTAAAACAGCGATTCCTGGGAATTTTTCAACATGAAGATTATCCCACTGAATATCCATACAAGTCAAAGGGATAATCTTCATGTGCTCATCCAAATCAGCGCCGTGTTTATCTCTCGTACTTGGATTCTGTGAAGTATTTTAGGCCTGATGTGAAGACAGTGACAGGGGAAGCTCTACGTACCTTT

Fln Alignment:

AllPine_a_c18405___NENSCQLCAVEKLTFDPPPVYCTPCGxRIKRNAQFYTIGAGDTRHCxCIPCYNDIRGDTVRVDGLTIQKLRLEKRRNDEETEEAWVQCDKCELWQHQVCALFNGRRNEGGQAEYTCPNCYTSDIERGERIPLPQSAVLGAKDLPKSYMSDHIEQRLFRRLKQEKQERARALGKSYDEVPGAEALVVRVVSSVDKKLEVKQRFLGIFQHEDYPTEYPYKSKG----------------------*SSCAHPNQRRVYLSYLDSVKYFRPDVKTVTGEALRTF
Q6YXY2_______________NENSCQLCKVEKLTFEPPPIYCSPCGxRIKRNAPYYTVGTGDTRHFxCIPCYNESRGDTIEVEGQNFLKARFEKKRNDEETEEWWVQCDKCECWQHQICALFNGRRNDGGQAEYTCPNCYVEEVKRGLRMPLPQSAVLGAKDLPRTVLSDHIEDRLFKRLKQERQDRAAQERKSIEEVPGAEGLVVRVVSSVDKKLEVKPRFLEIFQEDNYPTEFPYKSKAVLLFQKIEGVEVCLFGMYVQEFGAECSYPNQRRVYLSYLDSVKYFRPEIRTVSGEALRTF

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain