SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene97244

Length: 1142 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene97244

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Phosphorylase-like protein protein [Arabidopsis thaliana] gb\|AEE85565.1\| Phosphorylase-like protein protein [Arabidopsis thaliana]	-	-	54%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	86%
Sma3	Putative uncharacterized protein	-	-	-

Source	InterPros	Term	Type	Identity
Sma3	Nucleoside phosphorylase domain	IPR000845	-	-
Sma3	Nucleoside phosphorylase	IPR018017	-	-
Sma3	Sugar transporter, conserved site	IPR005829	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT4G28940.1	Phosphorylase superfamily protein chr4:14274414-14276920 FORWARD LENGTH=348	54%
RefSeq	Arabidopsis thaliana	NP_194623.2	Phosphorylase-like protein protein [Arabidopsis thaliana]	54%
RefSeq	Populus trichocarpa	XP_002331152.1	predicted protein [Populus trichocarpa]	66%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: B8LL97

Fln msg:

Fln protein: MMKIITAVHSIWALIIVLLMVDLSSVDALIASPKLQRIIHKINCHGPYLGIVVPNAFEMDPLLQSSSFNVSKTLDIAGRRFHIGSVDKHKVIIVMSGLAMLNSGLTTQLLLSFFKVKGVIHYGIAGNANSSLHIGYVTVPRYWAHTGLWNWQRYGDGPNDELSLESNGDYTRKYGYLHFGNFTTPSDQNSSNLLNNVWYQPEEVFPVDGTPEVRQHAFWVPVDKRYYQIAKGLESLELEKCLNSTTCLSNTPKAVLVQRGASANVFVDNAAYRNFLYTKFKISPIDMESAAVALVCLQQRLPFIAIRALSDLAGGGTSERNEAAVFSGLASQNAVTAVIHFIKSL*

Protein Length: 347

Fln nts: GGACTCAAGCAGAAGAGGGACTGGAGTTCGGCTTTGAAAAC_-_ATGATGAAGATTATCACTGCAGTCCACTCTATATGGGCGCTAATCATAGTACTATTAATGGTCGATTTATCATCAGTGGATGCCCTAATTGCATCGCCAAAGCTTCAGAGAATCATTCACAAGATCAATTGCCATGGCCCATATCTCGGCATCGTTGTTCCGAACGCTTTCGAGATGGATCCTCTTCTGCAATCTTCGTCTTTCAATGTCTCCAAGACTCTGGATATTGCTGGGAGAAGATTTCATATAGGAAGCGTTGATAAGCACAAAGTCATCATTGTCATGTCAGGATTGGCAATGCTGAATTCAGGACTAACAACTCAGTTACTGCTGAGTTTCTTCAAAGTGAAAGGAGTCATCCACTACGGAATTGCAGGGAACGCCAACTCTTCTTTGCACATCGGATATGTTACAGTTCCTCGTTATTGGGCTCATACTGGCCTCTGGAATTGGCAGAGATATGGAGATGGACCTAATGATGAACTTTCTCTGGAATCAAATGGAGATTACACACGAAAATACGGGTACCTTCACTTTGGAAATTTCACAACCCCGTCAGATCAGAACTCAAGCAACCTCCTTAATAATGTGTGGTATCAACCAGAGGAAGTTTTTCCAGTGGATGGAACCCCAGAGGTCAGGCAACATGCATTTTGGGTGCCTGTCGATAAGCGCTATTATCAGATTGCAAAGGGCCTTGAGAGTCTGGAGTTGGAAAAATGTTTGAACTCAACAACTTGTCTGTCAAATACTCCCAAGGCTGTTCTAGTACAAAGAGGAGCGAGTGCAAATGTGTTTGTGGACAATGCAGCGTACAGAAACTTCCTCTACACCAAGTTCAAGATAAGTCCCATCGACATGGAAAGTGCAGCTGTAGCGCTGGTTTGCCTTCAACAAAGACTGCCATTCATAGCAATAAGAGCTCTTTCTGATTTGGCTGGAGGGGGAACTTCTGAGCGTAATGAAGCAGCTGTCTTTTCTGGGCTGGCTAGCCAAAATGCTGTAACTGCTGTAATTCATTTTATCAAGTCTTTGTAA___CACTGAGTTGTTTCTTACTCCCATCTCTTCAGGGACATGACATTGATTTCTATTGCACTTAGC

Fln Alignment:

AllPine_a_c17240___MMKIITAVHSIWALIIVL-LMVDLSSVDALIASPKLQRIIHKINCHGPYLGIVVPNAFEMDPLLQSSSFNVSKTLDIAGRRFHIGSVDKHKVIIVMSGLAMLNSGLTTQLLLSFFKVKGVIHYGIAGNANSSLHIGYVTVPRYWAHTGLWNWQRYGDGPNDELSLESNGDYTRKYGYLHFGNFTTPSDQNSSNLLNNVWYQPEEVFPVDGTPEVRQHAFWVPVDKRYYQIAKGLESLELEKCLNSTTCLSNTPKAVLVQRGASANVFVDNAAYRNFLYTKFKISPIDMESAAVALVCLQQRLPFIAIRALSDLAGGGTSERNEAAVFSGLASQNAVTAVIHFIKSL
B8LL97_______________MMKIFTAIHCIWMLIIVTALMVDLSSVDALLPLPKVQRIIRKINRHGPYLGIVVPNAFEMDPLLQSSSFNVSKTLDVAGRRFHIGSIHKHRVIIVMSGLGMLNSGITTQLLLSFFEVKGVVHYGIAGNANSSLHIGDVTIPRYWAHTGLWNWQRYGDGPSDELSLESNGDYTRQIGYLDFANFTTPSNQSSGNLLNNVWYQPEEVFPVNGTPEVRQHAFWVPVDEHYYQIAKSLETLKLEGCLNSTTCLSNTPKAVLVERGSSANVFVDNAAYRNFLYTKFNISPIDMESAAVALVCLEQGLPFIAIRSLSDLAGGGTSESNQAAVFAGLASQNAVTAVIQFIKDL

SNPs (tot: 5)

Position	A %	C %	G %	T %	Probability
313	66		33		0.997456
374			75	25	0.996473
474			80	20	0.995493
485		80		20	0.995493
1090		33		66	0.997454

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain