SustainPineDB

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Assembly info
Unigenes
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SSRs
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ECs
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miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene95806

Length: 595 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v3.0_unigene95806 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Os03g0326600 protein n=2 Tax=Oryza sativa RepID=Q10M15_ORYSJ	-	-	2.0e-11	75%
FL-Next	tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida).	-	-	0.0	75%

Source	Gene names
Sma3	At1g09230; GSVIVT00038819001; LOC_Os03g21020; Os03g0326600; OsI_11395; OsJ_10687; PHYPADRAFT_135013; POPTRDRAFT_729948; RCOM_1122320;

Source	GOs	Term	Type	e value	Identity
Sma3	nucleotide binding	GO:0000166	Molecular Function	0.0	-
Sma3	nucleic acid binding	GO:0003676	Molecular Function	0.0	-

Source	InterPros	Term	Type	e value	Identity
Sma3	RNA recognition motif domain	IPR000504	-	0.0	-
Sma3	Nucleotide-binding, alpha-beta plait	IPR012677	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT1G09230.1	RNA-binding (RRM/RBD/RNP motifs) family protein chr1:2979637-2982563 REVERSE LENGTH=442	5.0e-12	67%
RefSeq	Arabidopsis thaliana	NP_172394.1	U11/U12 small nuclear ribonucleoprotein 65 kDa protein [Arabidopsis thaliana]	6.0e-12	67%
RefSeq	Populus trichocarpa	XP_002319145.1	predicted protein [Populus trichocarpa]	8.0e-12	69%

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain