SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene93669

Length: 582 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene93669

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	RecName: Full=Magnesium transporter MRS2-F sp\|A2WY50.1\|MRS2F_ORYSI RecName: Full=Magnesium transporter MRS2-F dbj\|BAB92573.1\| P0497A05.17 [Oryza sativa Japonica Group] dbj\|BAB92606.1\| putative MRS2-7 [Oryza sativa Japonica Group] dbj\|BAD82756.1\| putative	-	-	2.0e-25	60%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	64%
Sma3	Magnesium transporter	-	-	3.231e-15	-

Source	Gene names
Sma3	At3g19640; B1417F08.35; GSVIVT00001499001; GSVIVT00019261001; MRS2-3; Os01g0869200; Os01g0908500; OsI_04582; OsI_04855; OsJ_04219; OsJ_04478; P0456E05.8; P0497A05.17; P0677H08.30; PHYPADRAFT_173741; POPTRDRAFT_175554; POPTRDRAFT_202135; POPTRDRAFT_217351;

Source	GOs	Term	Type	Identity
Sma3	plasma membrane	GO:0005886	Cellular Component	-
Sma3	membrane	GO:0016020	Cellular Component	-
Sma3	metal ion transmembrane transporter activity	GO:0046873	Molecular Function	-
Sma3	metal ion transport	GO:0030001	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB	IPR002523	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT3G19640.1	MGT4, MRS2-3 magnesium transporter 4 chr3:6820969-6823104 FORWARD LENGTH=484	2.0e-28	60%
RefSeq	Arabidopsis thaliana	NP_188598.2	magnesium transporter MRS2-3 [Arabidopsis thaliana]	3.0e-28	60%
RefSeq	Populus trichocarpa	XP_002310545.1	magnesium transporter, partial [Populus trichocarpa]	1.0e-33	65%

Full-Lengther Next Prediction

SNPs (tot: 22)

Position	A %	C %	G %	T %	Probability
109		40	60		1.0
131	60		40		1.0
138		75	25		0.996473
158	75			25	0.996473
167	25		75		0.996473
174		28	71		1.0
190		66		33	1.0
208		33		66	1.0
210	71		28		1.0
221		33		66	1.0
322	25			75	1.0
324		75		25	1.0
331		75		25	1.0
351			28	71	1.0
356	28		71		1.0
358	71	28			1.0
477	14			71	0.984337
479	14	14			0.984337
493			14	85	0.993533
497	85	14			0.993533
500	85	14			0.993533
539		80	20		0.995493

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain