SustainPineDB

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Assembly info
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SNPs
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ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene81468

Length: 163 nt

UniGene Fasta

>sp_v3.0_unigene81468
TTATGTTATACTTGCAACTTATACATGTATATTTTTTTAGTACCATGTTCAATGCAGGAACGGACACATCTTCGATTACAGTGGAATGGGCAATAGCTGAGTTGATACGCCACCCGAACATGATGAAGAGATGCCAAGAAGAAATAGAGTCGGCAGTAAAAGG

Ace file of the UniGene sp_v3.0_unigene81468

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Flavonoid 3` hydroxylase 2 protein n=1 Tax=Brassica rapa subsp. campestris RepID=B0ZTB3_BRACM	-	-	2.0e-08	71%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	71%
Sma3	Flavonoid 3'-hydroxylase	-	-	1.617e-15	-

Source	Gene names
Sma3	CYP75; F3`H2;

Source	GOs	Term	Type	Identity
Sma3	monooxygenase activity	GO:0004497	Molecular Function	-
Sma3	iron ion binding	GO:0005506	Molecular Function	-
Sma3	electron carrier activity	GO:0009055	Molecular Function	-
Sma3	heme binding	GO:0020037	Molecular Function	-

Source	InterPros	Term	Type	Identity
Sma3	Cytochrome P450	IPR001128	-	-
Sma3	Aminoacyl-tRNA synthetase, class I, conserved site	IPR001412	-	-
Sma3	Cytochrome P450, E-class, group I	IPR002401	-	-
Sma3	Cytochrome P450, E-class, group IV	IPR002403	-	-
Sma3	Cytochrome P450, conserved site	IPR017972	-	-
Sma3		IPR017973	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT5G06900.1	CYP93D1 cytochrome P450, family 93, subfamily D, polypeptide 1 chr5:2136160-2137925 REVERSE LENGTH=507	1.0e-11	59%
RefSeq	Arabidopsis thaliana	NP_196307.1	cytochrome P450, family 93, subfamily D, polypeptide 1 [Arabidopsis thaliana]	1.0e-11	59%
RefSeq	Populus trichocarpa	XP_002330996.1	predicted protein [Populus trichocarpa]	2.0e-11	61%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LME1

Fln msg: Distance to subject end: 168 aas, your sequence is shorter than subject: 53 - 516

Fln protein: MLYLQLIHVYFFSTMFNAGTDTSSITVEWAIAELIRHPNMMKRCQEEIESAVK

Protein Length: 54

Fln nts: TTATGTTATACTTGCAACTTATACATGTATATTTTTTTAGTACCATGTTCAATGCAGGAACGGACACATCTTCGATTACAGTGGAATGGGCAATAGCTGAGTTGATACGCCACCCGAACATGATGAAGAGATGCCAAGAAGAAATAGAGTCGGCAGTAAAAGG

Fln Alignment:

GDTE5QK01B110M___MFNAGTDTSSITVEWAIAELIRHPNMMKRCQEEIESAV
B8LME1_______________LFTAGTDTSASTVEWAMSELIRHPKMMKKCQQEVESAI

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain