UniGene Name: sp_v3.0_unigene81347
Length: 229 nt
UniGene Fasta |
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>sp_v3.0_unigene81347
A |
Ace file of the UniGene sp_v3.0_unigene81347 |
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Annotations |
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Source | Descriptions | Term | Type | e value | Identity |
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AutoFact | Rho GTPase Rac, putative [Penicillium marneffei ATCC 18224] gb|AAN77094.1| CDC42-like protein CflB [Penicillium marneffei] gb|EEA19598.1| Rho GTPase Rac, putative [Penicillium marneffei ATCC 18224] | - | - | 4.0e-22 | 68% |
FL-Next | tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). | - | - | 0.0 | 63% |
Sma3 | GTPase protein ROP4 | - | - | 4.061e-08 | - |
Source | Gene names |
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Sma3 | ARAC1; ARAC10; ARAC11; ARAC3; ARAC4; ARAC5; ARAC6; ARAC8; ATGP2; ATGP3; At1g20090; At1g75840; At2g17800; At3g48040; At4g35020; At5g62880; GSVIVT00014385001; GSVIVT00016143001; GSVIVT00036117001; GSVIVT00036734001; LLP-Rop1; LOC_Os02g58730; M4E13.80; OJ128 |
Source | GOs | Term | Type | e value | Identity |
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Sma3 | intracellular | GO:0005622 | Cellular Component | 0.0 | - |
Sma3 | nucleolus | GO:0005730 | Cellular Component | 0.0 | - |
Sma3 | cytoplasm | GO:0005737 | Cellular Component | 0.0 | - |
Sma3 | spindle | GO:0005819 | Cellular Component | 0.0 | - |
Sma3 | plasma membrane | GO:0005886 | Cellular Component | 0.0 | - |
Sma3 | phragmoplast | GO:0009524 | Cellular Component | 0.0 | - |
Sma3 | membrane | GO:0016020 | Cellular Component | 0.0 | - |
Sma3 | site of polarized growth | GO:0030427 | Cellular Component | 0.0 | - |
Sma3 | apical part of cell | GO:0045177 | Cellular Component | 0.0 | - |
Sma3 | GTP binding | GO:0005525 | Molecular Function | 0.0 | - |
Sma3 | small GTPase mediated signal transduction | GO:0007264 | Biological Process | 0.0 | - |
Sma3 | negative regulation of abscisic acid mediated signaling pathway | GO:0009788 | Biological Process | 0.0 | - |
Source | InterPros | Term | Type | e value | Identity |
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Sma3 | Small GTPase superfamily | IPR001806 | - | 0.0 | - |
Sma3 | Small GTPase superfamily, Rho type | IPR003578 | - | 0.0 | - |
Sma3 | Small GTP-binding protein domain | IPR005225 | - | 0.0 | - |
Sma3 | IPR013753 | - | 0.0 | - |
Source | Species | ID | Description | e value | Identity |
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ATG | Arabidoptis thaliana | AT4G35020.1 | ARAC3, ROP6, RHO1PS, ATROP6, RAC3 RAC-like 3 chr4:16673176-16674540 FORWARD LENGTH=198 | 6.0e-18 | 63% |
RefSeq | Arabidopsis thaliana | NP_001190917.1 | Rac-like GTP-binding protein ARAC3 [Arabidopsis thaliana] | 7.0e-18 | 63% |
RefSeq | Populus trichocarpa | XP_002326847.1 | predicted protein, partial [Populus trichocarpa] | 5.0e-18 | 51% |
Full-Lengther Next Prediction |
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Fln status: Internal
Fln database: coniferopsida.fasta
Fln subject: A9NN97
Fln msg: Distance to subject end: 45 aas, your sequence is shorter than subject: 75 - 198
Fln protein:
T
Protein Length:
76
Fln nts:
A
Fln Alignment:
GDTE5QK01A9C99___DVFLICFSIISPHSYDNVKSKWFPEIQHHAPGVPIILVGTKSDLRGDEAMLA
A9NN97_______________DVFILAFSLISRASYENVSKKWIPELRHYAPGVPIILVGTKLDLREDKQFYA
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain