SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene81132

Length: 135 nt

UniGene Fasta

>sp_v3.0_unigene81132
TCGCTATGAAATCTGCATTGACCAGATTCACAAAAGCACTAGAGATAGGGGTCTGCGAATAAGCGAAGAAAGGGTACTGTTTGAGGGTTCTCCTCAAGAACCACTGGAATCAATCCAGGTACAAATTGCGGATGT

Ace file of the UniGene sp_v3.0_unigene81132

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	9.0e-07	83%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	83%

Source	GOs	Term	Type	Identity
Sma3	phosphoglycerate dehydrogenase activity	GO:0004617	Molecular Function	-
Sma3	amino acid binding	GO:0016597	Molecular Function	-
Sma3	NAD binding	GO:0051287	Molecular Function	-
Sma3	L-serine biosynthetic process	GO:0006564	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Amino acid-binding ACT	IPR002912	-	-
Sma3	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain	IPR006139	-	-
Sma3	D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding	IPR006140	-	-
Sma3	D-3-phosphoglycerate dehydrogenase	IPR006236	-	-
Sma3		IPR015508	-	-
Sma3	NAD(P)-binding domain	IPR016040	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NXI5

Fln msg: Distance to subject end: 115 aas, your sequence is shorter than subject: 44 - 622

Fln protein: RYEICIDQIHKSTRDRGLRISEERVLFEGSPQEPLESIQVQIAD

Protein Length: 45

Fln nts: TCGCTATGAAATCTGCATTGACCAGATTCACAAAAGCACTAGAGATAGGGGTCTGCGAATAAGCGAAGAAAGGGTACTGTTTGAGGGTTCTCCTCAAGAACCACTGGAATCAATCCAGGTACAAATTGCGGATGT

Fln Alignment:

GDTE5QK01BKVXA___RDRGLRISEERVLFEGSPQEPLESIQVQIAD
A9NXI5_______________RQRGLRLSEERILLDGSPQEPLESIQVQIAD

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain