SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene81115

Length: 120 nt

UniGene Fasta

>sp_v3.0_unigene81115
CAACCGTGCCACACTGGCTTTCAGACCTCCAGCATCAACTTTTAAGCCCATTGTTTATTTGGCAGCTTTAGCTGAAGGACCCGAGGTCATATTCTTGTAGATGAACGATACACACTTGGT

Ace file of the UniGene sp_v3.0_unigene81115

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Penicillin-binding protein n=1 Tax=Physcomitrella patens RepID=Q3LHF4_9BRYO	-	-	8.0e-06	85%
FL-Next	tr=Penicillin-binding protein; Physcomitrella patens subsp. patens (Moss).	-	-	0.0	85%
Sma3	Penicillin-binding protein	-	-	9.025e-11	-

Source	Gene names
Sma3	PBP; PHYPADRAFT_85755;

Source	GOs	Term	Type	Identity
Sma3	peptidoglycan-based cell wall	GO:0009274	Cellular Component	-
Sma3	catalytic activity	GO:0003824	Molecular Function	-
Sma3	peptidase activity	GO:0008233	Molecular Function	-
Sma3	penicillin binding	GO:0008658	Molecular Function	-
Sma3	transferase activity, transferring pentosyl groups	GO:0016763	Molecular Function	-
Sma3	peptidoglycan biosynthetic process	GO:0009252	Biological Process	-
Sma3	response to antibiotic	GO:0046677	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Glycosyl transferase, family 51	IPR001264	-	-
Sma3	Penicillin-binding protein, transpeptidase	IPR001460	-	-
Sma3	Penicillin-binding protein 1A	IPR011816	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: A9SYN1

Fln msg: Unexpected STOP codon at 3' end. Distance to subject end: 276 aas, your sequence is shorter than subject: 33 - 900

Fln protein: NRATLAFRPPASTFKPIVYLAALAEGPEVIFL*

Protein Length: 34

Fln nts: CAACCGTGCCACACTGGCTTTCAGACCTCCAGCATCAACTTTTAAGCCCATTGTTTATTTGGCAGCTTTAGCTGAAGGACCCGAGGTCATATTCTTGTAGATGAACGATACACACTTGGT

Fln Alignment:

GDTE5QK01B5PZR___NRATLAFRPPASTFKPIVYLAALAEGPE
A9SYN1_______________NRATQAYRPPGSTFKPIVYLAALAEGIE

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain