SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene81067

Length: 107 nt

UniGene Fasta

>sp_v3.0_unigene81067
TATGTCCAGGAGTGGTGTCTTGTGCTGACATTGTCGCACTTGCTGCTCGAGATGCTGTTGTTGCGATTAAAGGACCGTACTGGGAAGTAAAGACAGGGCGCAGGGAC

Ace file of the UniGene sp_v3.0_unigene81067

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Peroxidase 27, putative n=1 Tax=Ricinus communis RepID=B9RXS2_RICCO	-	-	9.0e-10	80%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	74%
Sma3	Peroxidase	-	-	1.936e-37	-

Source	ECs	Term	Type	e value	Identity
Sma3	Peroxidase.	EC:1.11.1.7	-	0.0	-

Source	KEGGs	Term	Identity
Sma3	Phenylalanine metabolism	00360	%
Sma3	Methane metabolism	00680	%
Sma3	Phenylpropanoid biosynthesis	00940	%
Sma3	Biosynthesis of phenylpropanoids	01061	%
Sma3	Metabolic pathways	01100	%
Sma3	Biosynthesis of secondary metabolites	01110	%

Source	Gene names
Sma3	At1g05260; At1g77100; At3g01190; At3g21770; At4g11290; At4g25980; At5g05340; At5g15180; At5g64120; CP; F14M9.7; F20B18.90; F22K20.17; F8L21.80; F8M21_70; FBP3; GSVIVT00006924001; GSVIVT00011734001; GSVIVT00015157001; GSVIVT00015158001; GSVIVT00015159001;

Source	GOs	Term	Type	Identity
Sma3	extracellular region	GO:0005576	Cellular Component	-
Sma3	cell wall	GO:0005618	Cellular Component	-
Sma3	nucleus	GO:0005634	Cellular Component	-
Sma3	cytoplasm	GO:0005737	Cellular Component	-
Sma3	plant-type cell wall	GO:0009505	Cellular Component	-
Sma3	membrane	GO:0016020	Cellular Component	-
Sma3	apoplast	GO:0048046	Cellular Component	-
Sma3	peroxidase activity	GO:0004601	Molecular Function	-
Sma3	iron ion binding	GO:0005506	Molecular Function	-
Sma3	calcium ion binding	GO:0005509	Molecular Function	-
Sma3	electron carrier activity	GO:0009055	Molecular Function	-
Sma3	heme binding	GO:0020037	Molecular Function	-
Sma3	response to oxidative stress	GO:0006979	Biological Process	-
Sma3	response to desiccation	GO:0009269	Biological Process	-
Sma3	response to cold	GO:0009409	Biological Process	-
Sma3	hyperosmotic salinity response	GO:0042538	Biological Process	-
Sma3	hydrogen peroxide catabolic process	GO:0042744	Biological Process	-
Sma3	respiratory burst	GO:0045730	Biological Process	-
Sma3	rhythmic process	GO:0048511	Biological Process	-
Sma3	defense response to fungus	GO:0050832	Biological Process	-
Sma3	oxidation-reduction process	GO:0055114	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Plant peroxidase	IPR000823	-	-
Sma3	Haem peroxidase, plant/fungal/bacterial	IPR002016	-	-
Sma3	Haem oxygenase-like, multi-helical	IPR016084	-	-
Sma3	Peroxidases heam-ligand binding site	IPR019793	-	-
Sma3	Peroxidase, active site	IPR019794	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT3G01190.1	Peroxidase superfamily protein chr3:67236-68477 REVERSE LENGTH=321	8.0e-14	74%
RefSeq	Arabidopsis thaliana	NP_186768.1	peroxidase 27 [Arabidopsis thaliana]	1.0e-13	74%
RefSeq	Populus trichocarpa	XP_002327937.1	predicted protein [Populus trichocarpa]	5.0e-14	77%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9P1P4

Fln msg: Distance to subject end: 174 aas, your sequence is shorter than subject: 35 - 324

Fln protein: CPGVVSCADIVALAARDAVVAIKGPYWEVKTGRRD

Protein Length: 36

Fln nts: TATGTCCAGGAGTGGTGTCTTGTGCTGACATTGTCGCACTTGCTGCTCGAGATGCTGTTGTTGCGATTAAAGGACCGTACTGGGAAGTAAAGACAGGGCGCAGGGAC

Fln Alignment:

GDTE5QK01B30LM___CPGVVSCADIVALAARDAVVAIKGPYWEVKTGRRD
A9P1P4_______________CPGVVSCADILALVARDAVHMLGGPFWNVPTGRRD

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain