SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene80676

Length: 185 nt

UniGene Fasta

>sp_v3.0_unigene80676
GAGCTCGGCCGGCTGAAGAATCTGGAACATTTGATGCTGTGGTTCAATGGGTTGGAGGGCAGGATCCCTCATGAGCTCGGTGGGTGCAGCCAGCTCAAGAATCTGATCCTCAACAACAATTTTCTAACAGGGGAGATACCAGAAAAACTTGCAGATTGCAGTGATTTAGAATGGATTTCTCTGAC

Ace file of the UniGene sp_v3.0_unigene80676

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Serine/threonine-protein kinase bri1, putative n=2 Tax=eudicotyledons RepID=B9S7D4_RICCO	-	-	2.0e-18	72%
FL-Next	tr=Receptor protein kinase; Pinus sylvestris (Scots pine).	-	-	0.0	45%

Source	Gene names
Sma3	GSVIVT00030658001; LOC_Os10g02500; OJ1014H12.3; OSJNBa0092N12.12; Os10g0114400; OsI_32557; OsJ_34509; POPTRDRAFT_657034; POPTRDRAFT_658669; RCOM_0777790; VITISV_033419;

Source	GOs	Term	Type	Identity
Sma3	protein serine/threonine kinase activity	GO:0004674	Molecular Function	-
Sma3	protein binding	GO:0005515	Molecular Function	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	protein phosphorylation	GO:0006468	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Leucine-rich repeat	IPR001611	-	-
Sma3	Phosphopantetheine attachment site	IPR006162	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	Leucine-rich repeat-containing N-terminal, type 2	IPR013210	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT2G01950.1	VH1, BRL2 BRI1-like 2 chr2:440805-444236 REVERSE LENGTH=1143	2.0e-16	51%
RefSeq	Arabidopsis thaliana	NP_178304.1	serine/threonine-protein kinase BRI1-like 2 [Arabidopsis thaliana]	2.0e-16	51%
RefSeq	Populus trichocarpa	XP_002312487.1	predicted protein [Populus trichocarpa]	3.0e-21	67%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: Q9FEU2

Fln msg: Distance to subject end: 580 aas, your sequence is shorter than subject: 61 - 1145

Fln protein: ELGRLKNLEHLMLWFNGLEGRIPHELGGCSQLKNLILNNNFLTGEIPEKLADCSDLEWISL

Protein Length: 62

Fln nts: GAGCTCGGCCGGCTGAAGAATCTGGAACATTTGATGCTGTGGTTCAATGGGTTGGAGGGCAGGATCCCTCATGAGCTCGGTGGGTGCAGCCAGCTCAAGAATCTGATCCTCAACAACAATTTTCTAACAGGGGAGATACCAGAAAAACTTGCAGATTGCAGTGATTTAGAATGGATTTCTCTGAC

Fln Alignment:

GDTE5QK01CSED7___ELGRLKNLEHLMLWFNGLEGRIPHELGGCSQLKNLILNNNFLTGEIPEKLADCSDLEWISL
Q9FEU2_______________ELGKLQKLEKLYLWDNELDGSIPAELGSCSSLKFVDLSTNSLSGSIPDSFGSLKNLSELEI

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain