SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene80341

Length: 309 nt

UniGene Fasta

>sp_v3.0_unigene80341
CCAACCACATCATCTAATCCACCATGGCAGACCAGTTGTCCGAAGAACAGATCTCGGAGCTCAAGAGCACATTCGATGTATTCGATAAAGATAAAGACGGGAAGATCACGGCCAAAGAGCTTGGTGGTATCATCAAAGCCCTGGGCAAAAATCCCACGGAAGAAGAGCTTCAAAACACGCTCAAATCACTAGACATCGATGGCAATGGCACCATTGATTTCCAGGAGTTCCTGAGCATCATGGCCAAGACCATACACGACAACTTCAGCGAGGAAGAGATCAGAGATGCCTTCAAGTCCCTAGATAAGG

Ace file of the UniGene sp_v3.0_unigene80341

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	PREDICTED: calmodulin 2-like n=1 Tax=Bos taurus RepID=UPI0001D57D89	-	-	2.0e-27	61%
FL-Next	tr=Putative calmodulin; Cryptomeria japonica (Japanese cedar) (Cupressus japonica).	-	-	0.0	57%
Sma3	Calmodulin	-	-	4.492e-26	-

Source	Gene names
Sma3	At1g66410; At2g27030; At2g41110; At3g22930; At3g43810; At3g56800; At5g21274; At5g37780; CAL1; CALM1; CAM; CAM-1; CAM-11; CAM-16; CAM-2; CAM1; CAM1-1; CAM1-2; CAM1-3; CAM2; CAM3; CAM4; CAM5; CAM53; CAM6; CAM7; CAM72; CAM81; CAMF-1; CAMF1; CCM1; CHLREDRAFT_

Source	GOs	Term	Type	Identity
Sma3	nucleus	GO:0005634	Cellular Component	-
Sma3	plasma membrane	GO:0005886	Cellular Component	-
Sma3	membrane	GO:0016020	Cellular Component	-
Sma3	calcium ion binding	GO:0005509	Molecular Function	-
Sma3	O-methyltransferase activity	GO:0008171	Molecular Function	-

Source	InterPros	Term	Type	Identity
Sma3	Calcium-binding EF-hand	IPR002048	-	-
Sma3	O-methyltransferase, family 3	IPR002935	-	-
Sma3	EF-hand-like domain	IPR011992	-	-
Sma3	EF-Hand 1, calcium-binding site	IPR018247	-	-
Sma3	EF-hand	IPR018248	-	-
Sma3	EF-HAND 2	IPR018249	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT5G21274.1	CAM6, ACAM-6 calmodulin 6 chr5:7214740-7215950 REVERSE LENGTH=149	6.0e-35	57%
RefSeq	Arabidopsis thaliana	NP_176814.1	calmodulin 4 [Arabidopsis thaliana]	1.0e-35	60%
RefSeq	Populus trichocarpa	XP_002330977.1	predicted protein [Populus trichocarpa]	3.0e-35	58%

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: Q0EER8

Fln msg: Distance to subject end: 54 aas, your sequence is shorter than subject: 95 - 149

Fln protein: MADQLSEEQISELKSTFDVFDKDKDGKITAKELGGIIKALGKNPTEEELQNTLKSLDIDGNGTIDFQEFLSIMAKTIHDNFSEEEIRDAFKSLDK

Protein Length: 96

Fln nts: CCAACCACATCATCTAATCCACC_-_ATGGCAGACCAGTTGTCCGAAGAACAGATCTCGGAGCTCAAGAGCACATTCGATGTATTCGATAAAGATAAAGACGGGAAGATCACGGCCAAAGAGCTTGGTGGTATCATCAAAGCCCTGGGCAAAAATCCCACGGAAGAAGAGCTTCAAAACACGCTCAAATCACTAGACATCGATGGCAATGGCACCATTGATTTCCAGGAGTTCCTGAGCATCATGGCCAAGACCATACACGACAACTTCAGCGAGGAAGAGATCAGAGATGCCTTCAAGTCCCTAGATAAGG

Fln Alignment:

GD4IA4404I8Q7Y___MADQLSEEQISELKSTFDVFDKDKDGKITAKELGGIIKALGKNPTEEELQNTLKSLDIDGNGTIDFQEFLSIMAKTIHDNFSEEEIRDAFKSLDK
Q0EER8_______________MAEQLTEDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFKVFDK

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain