SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene80338

Length: 212 nt

UniGene Fasta

>sp_v3.0_unigene80338
TACATGCGCTATTCTTGTTCTTTTGTTCGTCGTACAGCCGCTTGGTATTTCGAAACTAACGTTCGTCTTCTCACCCATTGTCATTTTATGGCTGGCCTTGAACGCTGGATTCGGTATATACAACTTGGCCAAGCACGATGATACGATCTTGAAGGCTTTCAACCCTTTCTATGCGTTCGACTACCTGATAAGAAACAAGTATGAAGGATGGA

Ace file of the UniGene sp_v3.0_unigene80338

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Potassium transporter 8 n=1 Tax=Pyrenophora tritici-repentis Pt-1C-BFP RepID=B2WNV8_PYRTR	-	-	1.0e-27	82%
FL-Next	sp=Potassium transporter 21; Oryza sativa subsp. japonica (Rice).	-	-	0.0	54%

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT4G13420.1	HAK5, ATHAK5 high affinity K+ transporter 5 chr4:7797038-7802174 REVERSE LENGTH=785	1.0e-15	45%
RefSeq	Arabidopsis thaliana	NP_567404.1	Potassium transporter 5 [Arabidopsis thaliana]	1.0e-15	45%
RefSeq	Populus trichocarpa	XP_002303504.1	predicted protein [Populus trichocarpa]	9.0e-18	49%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: Q75G84

Fln msg: Distance to subject end: 500 aas, your sequence is shorter than subject: 70 - 799

Fln protein: TCAILVLLFVVQPLGISKLTFVFSPIVILWLALNAGFGIYNLAKHDDTILKAFNPFYAFDYLIRNKYEGW

Protein Length: 71

Fln nts: TACATGCGCTATTCTTGTTCTTTTGTTCGTCGTACAGCCGCTTGGTATTTCGAAACTAACGTTCGTCTTCTCACCCATTGTCATTTTATGGCTGGCCTTGAACGCTGGATTCGGTATATACAACTTGGCCAAGCACGATGATACGATCTTGAAGGCTTTCAACCCTTTCTATGCGTTCGACTACCTGATAAGAAACAAGTATGAAGGATGGA

Fln Alignment:

GD4IA4404H65PW___TCAILVLLFVVQPLGISKLTFVFSPIVILWLALNAGFGIYNLAKHDDTILKAFNPFYAFDYLIRNKYEGW
Q75G84_______________TVAILVVLFAIQRYGTDKVGYSFAPIILLWLLLIGATGLYNLIKHDISVLRAFNPKYIIDYFRRNKKEGW

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain