SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene80277

Length: 202 nt

UniGene Fasta

>sp_v3.0_unigene80277
GAATTATCTCGAAAAGATTGTCTTGCACAACAGCCGATATGAATCCGTTGGTCTGAATATCTTGCCAGATGAATTTTGTCGTCTGCAATCCTTAAATTACTTCAAGTTACATGGTTGTTCAGAGATTAAGTCGCTCCCAGCTTCATTTGGCAGTTTAAAGAACCTCCAAACTCTCCATTTGTCCTTCTGCTCCAGGCTGCAG

Ace file of the UniGene sp_v3.0_unigene80277

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	NBS-LRR disease resistance protein homologue [Hordeum vulgare]	-	-	5.0e-06	50%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	50%

Source	Species	ID	Description	e value	Identity
RefSeq	Populus trichocarpa	XP_002328456.1	predicted protein [Populus trichocarpa]	7.0e-11	56%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NW11

Fln msg: Distance to subject end: 205 aas, your sequence is shorter than subject: 67 - 495

Fln protein: NYLEKIVLHNSRYESVGLNILPDEFCRLQSLNYFKLHGCSEIKSLPASFGSLKNLQTLHLSFCSRLQ

Protein Length: 68

Fln nts: GAATTATCTCGAAAAGATTGTCTTGCACAACAGCCGATATGAATCCGTTGGTCTGAATATCTTGCCAGATGAATTTTGTCGTCTGCAATCCTTAAATTACTTCAAGTTACATGGTTGTTCAGAGATTAAGTCGCTCCCAGCTTCATTTGGCAGTTTAAAGAACCTCCAAACTCTCCATTTGTCCTTCTGCTCCAGGCTGCAG

Fln Alignment:

GD4IA4404H9XS7___YLEKIVLHNSRYESVGLNILPDEFCRLQSLNYFKLHGCSEIKSLPASFGSLKNLQTLHLSFCSRLQ
A9NW11_______________HLERIVVAGFLSGHVHLTKLPKEFCRLRSLRDLVLTECSKMKSLPDSFCHLWNLQHIDLSFCCNLE

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain