SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene79775

Length: 186 nt

UniGene Fasta

>sp_v3.0_unigene79775
TCTTGAAAGCTTTCTCTCCAGTTTATATAGTGCGGTATTTTAGAAGAGGGAAAAAACATAGCTGGGCTTCTCTAGGAGGCATTATGCTTAGTGTAACAGGTACAGAAGCGCTCTTTGCTGATTTGGGCCTATTTTTCGACCTTACCTCTTCAAATCGCATTCACATCAGTTTGTGTTTCCTTGCCT

Ace file of the UniGene sp_v3.0_unigene79775

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	RecName: Full=Putative potassium transporter 12; AltName: Full=OsHAK12 emb\|CAD21002.1\| putative potasium transporter [Oryza sativa Japonica Group] gb\|EAZ41864.1\| hypothetical protein OsJ_26409 [Oryza sativa Japonica Group]	-	-	4.0e-09	80%
FL-Next	Isoform 2 of Putative potassium transporter 12 OS=Oryza sativa subsp. japonica GN=HAK12	-	-	0.0	80%
Sma3	Putative potassium transporter	-	-	4.209e-10	-

Source	Gene names
Sma3	At1g31120; At2g35060; GSVIVT00030138001; HAK1; HAK11; HAK12; HvHAK1; KUP10; KUP11; LOC_Os04g32920; LOC_Os04g52390; LOC_Os08g10550; OSIGBa0155K12.6; OSJNBa0052O12.31; OSJNBa0070C17.23; OSJNBb0012E08.7; Os01g0930400; Os02g0518600; Os04g0401700; Os04g0613900

Source	GOs	Term	Type	Identity
Sma3	plasma membrane	GO:0005886	Cellular Component	-
Sma3	membrane	GO:0016020	Cellular Component	-
Sma3	integral to membrane	GO:0016021	Cellular Component	-
Sma3	potassium ion transmembrane transporter activity	GO:0015079	Molecular Function	-
Sma3	potassium ion binding	GO:0030955	Molecular Function	-
Sma3	potassium ion transport	GO:0006813	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	K+ potassium transporter	IPR003855	-	0.0	-
Sma3		IPR018519	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT2G35060.2	KUP11 K+ uptake permease 11 chr2:14775184-14778184 REVERSE LENGTH=793	3.0e-11	74%
RefSeq	Arabidopsis thaliana	NP_181051.1	Potassium transporter 11 [Arabidopsis thaliana]	4.0e-11	74%
RefSeq	Populus trichocarpa	XP_002303504.1	predicted protein [Populus trichocarpa]	4.0e-13	77%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: Q8VXB1-2

Fln msg: Distance to subject end: 463 aas, your sequence is shorter than subject: 61 - 582

Fln protein: LKAFSPVYIVRYFRRGKKHSWASLGGIMLSVTGTEALFADLGLFFDLTSSNRIHISLCFLA

Protein Length: 62

Fln nts: TCTTGAAAGCTTTCTCTCCAGTTTATATAGTGCGGTATTTTAGAAGAGGGAAAAAACATAGCTGGGCTTCTCTAGGAGGCATTATGCTTAGTGTAACAGGTACAGAAGCGCTCTTTGCTGATTTGGGCCTATTTTTCGACCTTACCTCTTCAAATCGCATTCACATCAGTTTGTGTTTCCTTGCCT

Fln Alignment:

GD4IA4404I0GOL___LKAFSPVYIVRYFRRGKKHSWASLGGIMLSVTGTE
Q8VXB1-2_____________LKAYNPVYIYRYFRRGKSESWTSLGGIMLSITGTE

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain