SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene79632

Length: 192 nt

UniGene Fasta

>sp_v3.0_unigene79632
TCTTGCTAGGTGCTTCCCCGAGGTATTTGAATGATGAATCCTACGAGGGGGGATTTGAACGTGGAGAGATCGATGCATATTTGAGCGCAATCAAATCCAACTATTCGGAATGGGTTTCCGGATTTGTTCCTCTACTAATTGCAGACGACCAACCGTCTATAGTGATCGACTTGTCTAGAAAATGGCTGAATA

Ace file of the UniGene sp_v3.0_unigene79632

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Hydrolase (Fragment) n=1 Tax=Platanus x acerifolia RepID=Q1M2Z1_PLAAC	-	-	1.0e-12	52%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	85%

Source	InterPros	Term	Type	e value	Identity
Sma3	Alpha/beta hydrolase fold-1	IPR000073	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT3G03990.1	alpha/beta-Hydrolases superfamily protein chr3:1033788-1034591 FORWARD LENGTH=267	1.0e-17	52%
RefSeq	Arabidopsis thaliana	NP_566220.1	alpha/beta-hydrolase domain-containing protein [Arabidopsis thaliana]	1.0e-17	52%
RefSeq	Populus trichocarpa	XP_002320690.1	predicted protein [Populus trichocarpa]	1.0e-16	49%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NSF2

Fln msg: Distance to subject end: 88 aas, your sequence is shorter than subject: 63 - 273

Fln protein: LLGASPRYLNDESYEGGFERGEIDAYLSAIKSNYSEWVSGFVPLLIADDQPSIVIDLSRKWLN

Protein Length: 64

Fln nts: TCTTGCTAGGTGCTTCCCCGAGGTATTTGAATGATGAATCCTACGAGGGGGGATTTGAACGTGGAGAGATCGATGCATATTTGAGCGCAATCAAATCCAACTATTCGGAATGGGTTTCCGGATTTGTTCCTCTACTAATTGCAGACGACCAACCGTCTATAGTGATCGACTTGTCTAGAAAATGGCTGAATA

Fln Alignment:

GD4IA4404JR9KH___LLGASPRYLNDESYEGGFERGEIDAYLSAIKSNYSEWVSGFVPLLIADDQPSIVIDLSRKWLN
A9NSF2_______________LLGASPRYLNDESYEGGSERGEIDGILSTIKSNYSAWVSGFVPLLIGVDQPSIVDDLSRKWLS

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain