SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene79064

Length: 214 nt

UniGene Fasta

>sp_v3.0_unigene79064
GCATTCATGGCAGTGTTATACATTTGCTCTATGCTGGGAACAGAAGGTGCGACATTCGAGATCCAGAACAACTGCCGATTCACGGTTTGGGCAGCCGGTTCACCGGGCGGTGGGAAACGTCTGGACAGAGGGCAGTCGTGGACGCTTCCAGTACTCACGAAAACAACAAGGGGCAGGTTGTGGGGACGCACTGGGTGTTCCTTCAACAGCAGCG

Ace file of the UniGene sp_v3.0_unigene79064

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Thaumatin-like protein L3 n=1 Tax=Pinus monticola RepID=D3IZ07_PINMO	-	-	5.0e-18	67%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	63%
Sma3	Thaumatin-like protein	-	-	7.195e-23	-

Source	Gene names
Sma3	5A1A.16; At4g11650; Cry j 3.3; Cry j 3.4; GSVIVT00001103001; GSVIVT00001105001; GSVIVT00001108001; GSVIVT00001112001; GmOLPb; OSM1; OSM34; POPTRDRAFT_180318; PR5; RASTL-4; T5C23.80; THN; TLP; TLPl2; Tam-TLP; Tl1; Tl3; VITISV_001194; VITISV_021587; VITISV_

Source	GOs	Term	Type	Identity
Sma3	xenobiotic metabolic process	GO:0006805	Biological Process	-
Sma3	defense response	GO:0006952	Biological Process	-
Sma3	response to biotic stimulus	GO:0009607	Biological Process	-
Sma3	response to salt stress	GO:0009651	Biological Process	-
Sma3	defense response to fungus	GO:0050832	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Thaumatin, pathogenesis-related	IPR001938	-	0.0	-
Sma3	Thaumatin, conserved site	IPR017949	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT4G11650.1	ATOSM34, OSM34 osmotin 34 chr4:7025127-7026113 REVERSE LENGTH=244	6.0e-21	57%
RefSeq	Arabidopsis thaliana	NP_192902.1	osmotin-like protein OSM34 [Arabidopsis thaliana]	8.0e-21	57%
RefSeq	Populus trichocarpa	XP_002299521.1	predicted protein, partial [Populus trichocarpa]	5.0e-23	55%

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LQJ2

Fln msg: Distance to subject end: 162 aas, atg_distance in limit (1-15): atg_distance = 10, your sequence is shorter than subject: 69 - 243

Fln protein: MAVLYICSMLGTEGATFEIQNNCRFTVWAAGSPGGGKRLDRGQSWTLPVLTKTTRGRLWGRTGCSFNSS

Protein Length: 70

Fln nts: GCATTC_-_ATGGCAGTGTTATACATTTGCTCTATGCTGGGAACAGAAGGTGCGACATTCGAGATCCAGAACAACTGCCGATTCACGGTTTGGGCAGCCGGTTCACCGGGCGGTGGGAAACGTCTGGACAGAGGGCAGTCGTGGACGCTTCCAGTACTCACGAAAACAACAAGGGGCAGGTTGTGGGGACGCACTGGGTGTTCCTTCAACAGCAGCG

Fln Alignment:

GD4IA4404JKAS3___AFMAVLYICSMLGTEGATFEIQNNCRFTVWAAGSP-GGGKRLDRGQSWTLPVLTKTTRGRLWGRTGCSFNSS
B8LQJ2_______________ALMAVLFVCAVQGVICATFEIRNECSFTVWAAGTPRGGGQKLERGQSWTVEVPAGTTLGRFWGRTGCSFDGS

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain