UniGene Name: sp_v3.0_unigene78829
Length: 192 nt
UniGene Fasta |
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>sp_v3.0_unigene78829
A |
Ace file of the UniGene sp_v3.0_unigene78829 |
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Annotations |
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Source | Descriptions | Term | Type | e value | Identity |
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AutoFact | alcohol dehydrogenase (EC 1.1.1.1) class III [Arabidopsis thaliana] | - | - | 1.0e-16 | 68% |
FL-Next | tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). | - | - | 0.0 | 74% |
Sma3 | Glutathione-dependent formaldehyde dehydrogenase | - | - | 6.541e-20 | - |
Source | ECs | Term | Type | e value | Identity |
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Sma3 | Oxidoreductases, Acting on the CH-OH group of donors, With NAD(+) or NADP(+) as acceptor. | EC:1.1.1.- | - | 8.357e-12 | - |
Source | KEGGs | Term | Type | e value | Identity |
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Sma3 | Glycolysis / Gluconeogenesis | 00010 | 6.95e-16 | % | |
Sma3 | Fatty acid metabolism | 00071 | 6.95e-16 | % | |
Sma3 | Glycine, serine and threonine metabolism | 00260 | 6.95e-16 | % | |
Sma3 | Tyrosine metabolism | 00350 | 6.95e-16 | % | |
Sma3 | Chloroalkane and chloroalkene degradation | 00625 | 6.95e-16 | % | |
Sma3 | Naphthalene degradation | 00626 | 6.95e-16 | % | |
Sma3 | Retinol metabolism | 00830 | 6.95e-16 | % | |
Sma3 | Metabolism of xenobiotics by cytochrome P450 | 00980 | 6.95e-16 | % | |
Sma3 | Drug metabolism - cytochrome P450 | 00982 | 6.95e-16 | % | |
Sma3 | Metabolic pathways | 01100 | 6.95e-16 | % | |
Sma3 | Biosynthesis of secondary metabolites | 01110 | 6.95e-16 | % | |
Sma3 | S-(hydroxymethyl)glutathione dehydrogenase. | EC:1.1.1.284 | - | 4.714e-19 | - |
Source | KEGGs | Term | Type | e value | Identity |
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Sma3 | Methane metabolism | 00680 | 4.714e-19 | % |
Source | Gene names |
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Sma3 | ADH; ADH2; ADHIII; Adh; At1g22440; At5g43940; CT208; F12K8.21; FDH; FDH1; GSH-FDH1; GSH-FDH2; GSVIVT00028477001; LOC_Os02g57040; MRH10.4; Os02g0815500; OsI_009236; OsJ_008550; P0643F09.4; PHYPADRAFT_105455; PHYPADRAFT_183406; POPTRDRAFT_1075155; POPTRDRAF |
Source | GOs | Term | Type | e value | Identity |
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Sma3 | cytoplasm | GO:0005737 | Cellular Component | 0.0 | - |
Sma3 | peroxisome | GO:0005777 | Cellular Component | 0.0 | - |
Sma3 | UDP-glucose 6-dehydrogenase activity | GO:0003979 | Molecular Function | 0.0 | - |
Sma3 | alcohol dehydrogenase (NAD) activity | GO:0004022 | Molecular Function | 0.0 | - |
Sma3 | zinc ion binding | GO:0008270 | Molecular Function | 0.0 | - |
Sma3 | oxidoreductase activity | GO:0016491 | Molecular Function | 0.0 | - |
Sma3 | S-(hydroxymethyl)glutathione dehydrogenase activity | GO:0051903 | Molecular Function | 0.0 | - |
Sma3 | S-nitrosoglutathione reductase activity | GO:0080007 | Molecular Function | 0.0 | - |
Sma3 | ethanol oxidation | GO:0006069 | Biological Process | 0.0 | - |
Sma3 | heat acclimation | GO:0010286 | Biological Process | 0.0 | - |
Sma3 | formaldehyde metabolic process | GO:0046292 | Biological Process | 0.0 | - |
Sma3 | seed development | GO:0048316 | Biological Process | 0.0 | - |
Sma3 | oxidation-reduction process | GO:0055114 | Biological Process | 0.0 | - |
Source | InterPros | Term | Type | e value | Identity |
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Sma3 | Legume lectin domain | IPR001220 | - | 0.0 | - |
Sma3 | Alcohol dehydrogenase superfamily, zinc-type | IPR002085 | - | 0.0 | - |
Sma3 | Alcohol dehydrogenase, zinc-type, conserved site | IPR002328 | - | 0.0 | - |
Sma3 | Alcohol dehydrogenase, C-terminal | IPR013149 | - | 0.0 | - |
Sma3 | Alcohol dehydrogenase GroES-like | IPR013154 | - | 0.0 | - |
Sma3 | Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase | IPR014183 | - | 0.0 | - |
Source | Species | ID | Description | e value | Identity |
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ATG | Arabidoptis thaliana | AT5G43940.2 | HOT5 GroES-like zinc-binding dehydrogenase family protein chr5:17684265-17686379 FORWARD LENGTH=391 | 2.0e-22 | 68% |
RefSeq | Arabidopsis thaliana | NP_199207.1 | alcohol dehydrogenase class-3 [Arabidopsis thaliana] | 2.0e-22 | 68% |
RefSeq | Populus trichocarpa | XP_002305695.1 | predicted protein [Populus trichocarpa] | 7.0e-23 | 57% |
Full-Lengther Next Prediction |
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Fln status: Putative C-terminus
Fln database: coniferopsida.fasta
Fln subject: A9NZ44
Fln msg: STOP codon was not found. Distance to subject end: 4 aas, your sequence is shorter than subject: 64 - 405
Fln protein:
I
Protein Length:
65
Fln nts:
A
Fln Alignment:
GD4IA4403HH886___FTGRRLVTTIFGGFKGKTQLPALVDKYMSKELKVEEYITHELPFSEINKAFDLLLEGRCLRC
A9NZ44_______________FSGRRIVATTFGGVKGKTQLPYLVEMFMNKEIRVEEFITHELPFSEINRAFELLLEGSCLRC
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain