SustainPineDB

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Assembly info
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SSRs
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ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene78722

Length: 228 nt

UniGene Fasta

>sp_v3.0_unigene78722
AAGCCGAGACTCCTGCTATTCGCAGTATCGAGACACTCGAGATCGAGATTGCCGAGATTATGAAGGGCAAGTTTGACCACTTCATGCAGAAAGAGATTTATGAGCAGCCCGAATCTGTTGTCAACACCATGCGTGGACGCGTGAACTTCGATGACTATAAGATCACCCTCGGAGGGCTGCGTGCTTATCTGCCCATTATTCGCCGCGGTCGCCGCATTGTCTTCTGCA

Ace file of the UniGene sp_v3.0_unigene78722

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	L-glutamine D-fructose 6-phosphate amidotansferase [Coprinopsis cinerea okayama7#130] gb\|EAU89635.1\| L-glutamine D-fructose 6-phosphate amidotansferase [Coprinopsis cinerea okayama7#130]	-	-	3.0e-28	83%
FL-Next	tr=Predicted protein; Ostreococcus lucimarinus (strain CCE9901).	-	-	0.0	56%

Source	Gene names
Sma3	LOC_Os11g03900; LOC_Os12g03720; MICPUCDRAFT_25777; MICPUN_93714; OSTLU_31870; OsI_34982; OsI_37368; OsJ_32847; OsJ_35119;

Source	GOs	Term	Type	Identity
Sma3	cytoplasm	GO:0005737	Cellular Component	-
Sma3	glutamine-fructose-6-phosphate transaminase (isomerizing) activity	GO:0004360	Molecular Function	-
Sma3	sugar binding	GO:0005529	Molecular Function	-
Sma3	carbohydrate biosynthetic process	GO:0016051	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Glutamine amidotransferase, class-II	IPR000583	-	-
Sma3	Sugar isomerase (SIS)	IPR001347	-	-
Sma3	Glucosamine-fructose-6-phosphate aminotransferase, isomerising	IPR005855	-	-
Sma3	Glutamine amidotransferase, type II	IPR017932	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT3G24090.1	" glutamine-fructose-6-phosphate transaminase (isomerizing)s;sugar binding;transaminases chr3:8697838-8700971 REVERSE LENGTH=677"	1.0e-17	52%
RefSeq	Arabidopsis thaliana	NP_189051.3	putative glucosamine-fructose-6-phosphate aminotransferase [Arabidopsis thaliana]	2.0e-17	52%
RefSeq	Populus trichocarpa	XP_002325906.1	predicted protein, partial [Populus trichocarpa]	2.0e-15	48%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: A4RXZ5

Fln msg: Distance to subject end: 312 aas, your sequence is shorter than subject: 75 - 686

Fln protein: AETPAIRSIETLEIEIAEIMKGKFDHFMQKEIYEQPESVVNTMRGRVNFDDYKITLGGLRAYLPIIRRGRRIVFC

Protein Length: 76

Fln nts: AAGCCGAGACTCCTGCTATTCGCAGTATCGAGACACTCGAGATCGAGATTGCCGAGATTATGAAGGGCAAGTTTGACCACTTCATGCAGAAAGAGATTTATGAGCAGCCCGAATCTGTTGTCAACACCATGCGTGGACGCGTGAACTTCGATGACTATAAGATCACCCTCGGAGGGCTGCGTGCTTATCTGCCCATTATTCGCCGCGGTCGCCGCATTGTCTTCTGCA

Fln Alignment:

GD4IA4403GGQSJ___RSIETLEIEIAEIMKGKFDHFMQKEIYEQPESVVNTMRGRVNFDD----YKITLGGLRAYLPIIRRGRRIVFC
A4RXZ5_______________RTIETLTMEVEQIMKGNFDHFMKKEIHEQPDAIQQTMRGRVVFDADGNVQRVFLGGMVDYLSTIRRSRRIILC

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain