UniGene Name: sp_v3.0_unigene78636
Length: 118 nt
This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense
UniGene Fasta (sense) |
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>sp_v3.0_unigene78636
A |
Ace file of the UniGene sp_v3.0_unigene78636 (antisense) |
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Annotations |
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Source | Descriptions | Term | Type | e value | Identity |
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AutoFact | Serine-threonine protein kinase, plant-type, putative n=1 Tax=Ricinus communis RepID=B9SNX7_RICCO | - | - | 1.0e-08 | 71% |
FL-Next | tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). | - | - | 0.0 | 84% |
Source | Gene names |
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Sma3 | 24K23.9; At1g70520; CRK2; F24J13.9; GSVIVT00002759001; GSVIVT00002761001; GSVIVT00010709001; GSVIVT00011366001; GSVIVT00013445001; GSVIVT00016037001; GSVIVT00016044001; GSVIVT00023428001; GSVIVT00023432001; GSVIVT00026073001; GSVIVT00035558001; GSVIVT0003 |
Source | GOs | Term | Type | e value | Identity |
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Sma3 | plasma membrane | GO:0005886 | Cellular Component | 0.0 | - |
Sma3 | integral to membrane | GO:0016021 | Cellular Component | 0.0 | - |
Sma3 | RNA binding | GO:0003723 | Molecular Function | 0.0 | - |
Sma3 | RNA-directed DNA polymerase activity | GO:0003964 | Molecular Function | 0.0 | - |
Sma3 | protein serine/threonine kinase activity | GO:0004674 | Molecular Function | 0.0 | - |
Sma3 | protein tyrosine kinase activity | GO:0004713 | Molecular Function | 0.0 | - |
Sma3 | receptor activity | GO:0004872 | Molecular Function | 0.0 | - |
Sma3 | protein binding | GO:0005515 | Molecular Function | 0.0 | - |
Sma3 | ATP binding | GO:0005524 | Molecular Function | 0.0 | - |
Sma3 | sugar binding | GO:0005529 | Molecular Function | 0.0 | - |
Sma3 | RNA-dependent DNA replication | GO:0006278 | Biological Process | 0.0 | - |
Sma3 | protein phosphorylation | GO:0006468 | Biological Process | 0.0 | - |
Sma3 | recognition of pollen | GO:0048544 | Biological Process | 0.0 | - |
Source | Species | ID | Description | e value | Identity |
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ATG | Arabidoptis thaliana | AT1G70520.1 | CRK2 cysteine-rich RLK (RECEPTOR-like protein kinase) 2 chr1:26584888-26587334 REVERSE LENGTH=649 | 1.0e-11 | 71% |
RefSeq | Arabidopsis thaliana | NP_177209.1 | cysteine-rich receptor-like protein kinase 2 [Arabidopsis thaliana] | 1.0e-11 | 71% |
RefSeq | Populus trichocarpa | XP_002308093.1 | predicted protein, partial [Populus trichocarpa] | 2.0e-13 | 71% |
Full-Lengther Next Prediction |
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Fln status: Internal
Fln database: coniferopsida.fasta
Fln subject: B8LLJ5
Fln msg: Distance to subject end: 31 aas, your sequence is shorter than subject: 39 - 505
Fln protein:
R
Protein Length:
40
Fln nts:
A
Fln Alignment:
GD4IA4403GZEYZ___RYEIIVGTARGLA*LHQESHIRVIHRDIKASNILLDDKH
B8LLJ5_______________RYEIIVGTARGLAYLHEESEIRIIHRDIKASNILLDNKY
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain