UniGene Name: sp_v3.0_unigene78547
Length: 159 nt
This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense
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>sp_v3.0_unigene78547
G |
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Source | Descriptions | Term | Type | e value | Identity |
---|---|---|---|---|---|
AutoFact | Ethylene-responsive transcription factor ERF114 n=3 Tax=Arabidopsis RepID=EF114_ARATH | - | - | 2.0e-11 | 66% |
FL-Next | tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). | - | - | 0.0 | 88% |
Sma3 | AP2/ERF domain-containing transcription factor | - | - | 1.0776e-42 | - |
Source | Gene names |
---|---|
Sma3 | ABI4-2; ABR1; AP2DCP; AT1G53910; At1g43160; At1g53910; At1g72360; At2g33710; At2g47520; At3g14230; At3g15210; At3g16770; At4g34410; At5g07310; At5g13330; At5g44210; At5g50080; At5g61890; At5g64750; B1011A07.39; B1045B05.13; BIERF1; BIERF2; BIERF4; CEF1; C |
Source | GOs | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | nucleus | GO:0005634 | Cellular Component | 0.0 | - |
Sma3 | nucleolus | GO:0005730 | Cellular Component | 0.0 | - |
Sma3 | membrane | GO:0016020 | Cellular Component | 0.0 | - |
Sma3 | nuclear body | GO:0016604 | Cellular Component | 0.0 | - |
Sma3 | sequence-specific DNA binding transcription factor activity | GO:0003700 | Molecular Function | 0.0 | - |
Sma3 | phosphatidylinositol phospholipase C activity | GO:0004435 | Molecular Function | 0.0 | - |
Sma3 | protein binding | GO:0005515 | Molecular Function | 0.0 | - |
Sma3 | transcription repressor activity | GO:0016564 | Molecular Function | 0.0 | - |
Sma3 | cadmium ion binding | GO:0046870 | Molecular Function | 0.0 | - |
Sma3 | regulation of transcription, DNA-dependent | GO:0006355 | Biological Process | 0.0 | - |
Sma3 | lipid metabolic process | GO:0006629 | Biological Process | 0.0 | - |
Sma3 | defense response | GO:0006952 | Biological Process | 0.0 | - |
Sma3 | response to osmotic stress | GO:0006970 | Biological Process | 0.0 | - |
Sma3 | GO:0007242 | Biological Process | 0.0 | - | |
Sma3 | response to abscisic acid stimulus | GO:0009737 | Biological Process | 0.0 | - |
Sma3 | response to glucose stimulus | GO:0009749 | Biological Process | 0.0 | - |
Sma3 | negative regulation of abscisic acid mediated signaling pathway | GO:0009788 | Biological Process | 0.0 | - |
Sma3 | induced systemic resistance, jasmonic acid mediated signaling pathway | GO:0009864 | Biological Process | 0.0 | - |
Sma3 | ethylene mediated signaling pathway | GO:0009873 | Biological Process | 0.0 | - |
Sma3 | negative regulation of ethylene mediated signaling pathway | GO:0010105 | Biological Process | 0.0 | - |
Sma3 | response to chitin | GO:0010200 | Biological Process | 0.0 | - |
Source | InterPros | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | Ornithine/DAP/Arg decarboxylase | IPR000183 | - | 0.0 | - |
Sma3 | AP2/ERF domain | IPR001471 | - | 0.0 | - |
Sma3 | Phospholipase C, phosphatidylinositol-specific, Y domain | IPR001711 | - | 0.0 | - |
Sma3 | Enolpyruvate transferase domain | IPR001986 | - | 0.0 | - |
Sma3 | Ubiquinol cytochrome reductase, transmembrane domain | IPR004192 | - | 0.0 | - |
Sma3 | IPR004348 | - | 0.0 | - | |
Sma3 | Rieske iron-sulphur protein, C-terminal | IPR005805 | - | 0.0 | - |
Sma3 | IPR005806 | - | 0.0 | - | |
Sma3 | Sugar transporter, conserved site | IPR005829 | - | 0.0 | - |
Sma3 | Ubiquinol-cytochrome c reductase, iron-sulphur subunit | IPR006317 | - | 0.0 | - |
Sma3 | Rieske iron-sulphur protein | IPR014349 | - | 0.0 | - |
Sma3 | DNA ligase, ATP-dependent, conserved site | IPR016059 | - | 0.0 | - |
Sma3 | Rieske [2Fe-2S] iron-sulphur domain | IPR017941 | - | 0.0 | - |
Sma3 | EF-Hand 1, calcium-binding site | IPR018247 | - | 0.0 | - |
Sma3 | Hemopexin/matrixin, conserved site | IPR018486 | - | 0.0 | - |
Source | Species | ID | Description | e value | Identity |
---|---|---|---|---|---|
ATG | Arabidoptis thaliana | AT5G61890.1 | Integrase-type DNA-binding superfamily protein chr5:24852639-24853744 REVERSE LENGTH=248 | 4.0e-17 | 82% |
RefSeq | Arabidopsis thaliana | NP_200995.1 | ethylene-responsive transcription factor ERF114 [Arabidopsis thaliana] | 5.0e-17 | 82% |
RefSeq | Populus trichocarpa | XP_002297877.1 | AP2/ERF domain-containing transcription factor [Populus trichocarpa] | 1.0e-16 | 82% |
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Fln status: Internal
Fln database: coniferopsida.fasta
Fln subject: A9P288
Fln msg: Distance to subject end: 245 aas, your sequence is shorter than subject: 52 - 429
Fln protein:
G
Protein Length:
53
Fln nts:
G
Fln Alignment:
GD4IA4403FO6DW___KAKTWGKWAAEIRDPKKAARVWLGTFETXXXXXXXXXXXALKFRGSRAKLN
A9P288_______________RQRPWGKWAAEIRDPKKAARVWLGTFDTAEDAARAYDDAALKFRGARAKLN
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain