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UniGene Name: sp_v3.0_unigene78444
Length: 240 nt
 UniGene Fasta
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| >sp_v3.0_unigene78444
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Ace file of the UniGene sp_v3.0_unigene78444
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If you push the Download ace button, you will download an ace file of this UniGene.
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| Annotations |
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| Source | Descriptions | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| AutoFact | Delta-1-pyrroline-5-carboxylate synthase (Fragment) n=2 Tax=Medicago RepID=P93325_MEDSA | - | - | 2.0e-27 | 87% |
| FL-Next | tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). | - | - | 0.0 | 93% |
| Sma3 | Pyrroline-5-carboxylate synthetase | - | - | 5.63e-26 | - |
| Source | ECs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | Glutamate-5-semialdehyde dehydrogenase. | EC:1.2.1.41 | - | 1.462e-24 | - |
| Source | KEGGs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | Arginine and proline metabolism | 00330 | 1.462e-24 | % | |
| Sma3 | Metabolic pathways | 01100 | 1.462e-24 | % | |
| Sma3 | 1-pyrroline-5-carboxylate dehydrogenase. | EC:1.5.1.12 | - | 3.127e-07 | - |
| Source | KEGGs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | Alanine, aspartate and glutamate metabolism | 00250 | 3.127e-07 | % | |
| Sma3 | Arginine and proline metabolism | 00330 | 3.127e-07 | % | |
| Sma3 | Metabolic pathways | 01100 | 3.127e-07 | % | |
| Sma3 | Glutamate 5-kinase. | EC:2.7.2.11 | - | 4.15e-28 | - |
| Source | KEGGs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | Arginine and proline metabolism | 00330 | 4.15e-28 | % | |
| Sma3 | Metabolic pathways | 01100 | 4.15e-28 | % |
| Source | Gene names |
|---|---|
| Sma3 | AT2G39800; At2g39800; At3g55610; CHLREDRAFT_130812; F1I16_20; GSD1; GSVIVT00018407001; GSVIVT00021384001; LOC_Os05g38150; MICPUCDRAFT_30966; MICPUN_59938; OJ1651_D06.9; OSTLU_1184; Os01g0848200; Os05g0455500; OsI_04432; OsI_20190; OsJ_04075; OsJ_18779; Ot |
| Source | GOs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | cytoplasm | GO:0005737 | Cellular Component | 0.0 | - |
| Sma3 | chloroplast | GO:0009507 | Cellular Component | 0.0 | - |
| Sma3 | membrane | GO:0016020 | Cellular Component | 0.0 | - |
| Sma3 | 1-pyrroline-5-carboxylate dehydrogenase activity | GO:0003842 | Molecular Function | 0.0 | - |
| Sma3 | glutamate 5-kinase activity | GO:0004349 | Molecular Function | 0.0 | - |
| Sma3 | glutamate-5-semialdehyde dehydrogenase activity | GO:0004350 | Molecular Function | 0.0 | - |
| Sma3 | oxidoreductase activity | GO:0016491 | Molecular Function | 0.0 | - |
| Sma3 | proline biosynthetic process | GO:0006561 | Biological Process | 0.0 | - |
| Sma3 | response to oxidative stress | GO:0006979 | Biological Process | 0.0 | - |
| Sma3 | metabolic process | GO:0008152 | Biological Process | 0.0 | - |
| Sma3 | response to water deprivation | GO:0009414 | Biological Process | 0.0 | - |
| Sma3 | embryo development ending in seed dormancy | GO:0009793 | Biological Process | 0.0 | - |
| Sma3 | hyperosmotic salinity response | GO:0042538 | Biological Process | 0.0 | - |
| Sma3 | root development | GO:0048364 | Biological Process | 0.0 | - |
| Sma3 | oxidation-reduction process | GO:0055114 | Biological Process | 0.0 | - |
| Source | InterPros | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | Gamma-glutamyl phosphate reductase GPR | IPR000965 | - | 0.0 | - |
| Sma3 | Aspartate/glutamate/uridylate kinase | IPR001048 | - | 0.0 | - |
| Sma3 | Glutamate/acetylglutamate kinase | IPR001057 | - | 0.0 | - |
| Sma3 | Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase | IPR005715 | - | 0.0 | - |
| Sma3 | Delta l-pyrroline-5-carboxylate synthetase | IPR005766 | - | 0.0 | - |
| Sma3 | Aldehyde dehydrogenase domain | IPR015590 | - | 0.0 | - |
| Sma3 | Aldehyde dehydrogenase, N-terminal | IPR016162 | - | 0.0 | - |
| Sma3 | Aldehyde dehydrogenase, C-terminal | IPR016163 | - | 0.0 | - |
| Source | Species | ID | Description | e value | Identity |
|---|---|---|---|---|---|
| ATG | Arabidoptis thaliana | AT3G55610.1 | P5CS2 delta 1-pyrroline-5-carboxylate synthase 2 chr3:20624278-20628989 REVERSE LENGTH=726 | 4.0e-28 | 79% |
| RefSeq | Arabidopsis thaliana | NP_191120.2 | Gamma-glutamyl phosphate reductase [Arabidopsis thaliana] | 5.0e-28 | 79% |
| RefSeq | Populus trichocarpa | XP_002315202.1 | predicted protein [Populus trichocarpa] | 1.0e-28 | 83% |
| Full-Lengther Next Prediction |
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Fln status: Internal
Fln database: coniferopsida.fasta
Fln subject: B8LR17
Fln msg: Warning!, your query overlaps and the subject is separated, and overlapping frame ERROR between 209 and 202, Distance to subject end: 57 aas, your sequence is shorter than subject: 81 - 749
Fln protein:
I
Protein Length:
82
Fln nts:
T
Fln Alignment:
GD4IA4403FT5K1___IDHIHEHGSAHTDCIITEDHDVAEVFLRQxxSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGxxxLLTTRWLLRG
B8LR17_______________IDHIHEHGSAHTDCIITEDRDVAEVFLHQxxSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGxxxLLTTRWLLRG
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain
