SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene77722

Length: 176 nt

UniGene Fasta

>sp_v3.0_unigene77722
CAATATGAAGCCAGAAATCGCTGTGTTTGTGGGTAGAACAGTGTTTGAGAGTGATTGGAGGGCAATTCTGGGTCATGTACAGGCACCGTGCTATATCATTCAAAGCAAGGAGGATATAGTTGTTCCCCTTGCCGTTGCAGAATATCTGAGAACACATCTCGGGGGAGAGACTTGGG

Ace file of the UniGene sp_v3.0_unigene77722

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Sigma factor sigb regulation protein rsbq, putative n=1 Tax=Ricinus communis RepID=B9R708_RICCO	-	-	1.0e-12	63%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	57%

Source	Gene names
Sma3	POPTRDRAFT_814354; RCOM_1587550;

Source	InterPros	Term	Type	e value	Identity
Sma3	Alpha/beta hydrolase fold-1	IPR000073	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT3G03990.1	alpha/beta-Hydrolases superfamily protein chr3:1033788-1034591 FORWARD LENGTH=267	6.0e-18	57%
RefSeq	Arabidopsis thaliana	NP_566220.1	alpha/beta-hydrolase domain-containing protein [Arabidopsis thaliana]	8.0e-18	57%
RefSeq	Populus trichocarpa	XP_002320690.1	predicted protein [Populus trichocarpa]	1.0e-18	62%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9P1M0

Fln msg: Distance to subject end: 42 aas, your sequence is shorter than subject: 58 - 281

Fln protein: NMKPEIAVFVGRTVFESDWRAILGHVQAPCYIIQSKEDIVVPLAVAEYLRTHLGGETW

Protein Length: 59

Fln nts: CAATATGAAGCCAGAAATCGCTGTGTTTGTGGGTAGAACAGTGTTTGAGAGTGATTGGAGGGCAATTCTGGGTCATGTACAGGCACCGTGCTATATCATTCAAAGCAAGGAGGATATAGTTGTTCCCCTTGCCGTTGCAGAATATCTGAGAACACATCTCGGGGGAGAGACTTGGG

Fln Alignment:

GD4IA4403HMKTT___NMKPEIAVFVGRTVFESDWRAILGHVQAPCYIIQSKEDIVVPLAVAEYLRTHLGGE
A9P1M0_______________NMRPEIALLVARTIFESDMRSILSDVKTPCSIIQTAKDIVVPMAVPYHMQGSLGGK

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain