SustainPineDB

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Assembly info
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ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene77343

Length: 434 nt

UniGene Fasta

>sp_v3.0_unigene77343
AGCGGACAACCTTTCTTGTGGGTTCTCAGGTCAGATATCGCAGAAGGGCAGGCTGCAATTTTGCCGGAGGGCTTTGTAGAACGAACAAAGAAACGGGCGTTGTTTGTGGGGTGGGCGCCACAGGTAAAAGTCCTTGCCCATCCTTCAGTGGGATTGTTCCTCACACACAATGGATGGAACTCTACGTTGGAGGCCATGAGCATGGGAGTTCCTGTAGTGGGATTCCCTTATTTTGGCGATCAGTTTCTCAACTGCAGATTCGCGAAGGAGGTGTGGAAGATCGGCCTCGATTTTGAAGATGTAGATGTGGATGATCAGAAGGTGGTCATGAAAGAAGAGGTTGTGGATGTTGTGATGAGGATGATGAGAACAGCGGAAGTAGAGAAGATGAAAGACAACGTTCTCAGGCTGAAGGAGTCCGCAACAAAGGCAGT

Ace file of the UniGene sp_v3.0_unigene77343

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	[GC] COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase	-	-	7.0e-05	37%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	86%
Sma3	Chromosome chr14 scaffold_9, whole genome shotgun sequence	-	-	2.582e-08	-

Source	Gene names
Sma3	AdGt-12; GSVIVT00001990001; GSVIVT00008150001; GSVIVT00013563001; GSVIVT00018316001; GSVIVT00018322001; GSVIVT00038013001; GSVIVT00038015001; GSVIVT00038016001; GSVIVT00038017001; Os02g0755500; OsI_08989; OsJ_08434; P0627E03.26; PHYPADRAFT_174128; PHYPADR

Source	GOs	Term	Type	e value	Identity
Sma3	transferase activity, transferring hexosyl groups	GO:0016758	Molecular Function	0.0	-
Sma3	metabolic process	GO:0008152	Biological Process	0.0	-

Source	InterPros	Term	Type	Identity
Sma3	UDP-glucuronosyl/UDP-glucosyltransferase	IPR002213	-	-
Sma3	Cytochrome P450, conserved site	IPR017972	-	-
Sma3	EF-Hand 1, calcium-binding site	IPR018247	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT1G22400.1	UGT85A1, ATUGT85A1 UDP-Glycosyltransferase superfamily protein chr1:7903851-7906607 REVERSE LENGTH=489	2.0e-31	49%
RefSeq	Arabidopsis thaliana	NP_173656.1	cytokinin-O-glucosyltransferase 2 [Arabidopsis thaliana]	2.0e-31	49%
RefSeq	Populus trichocarpa	XP_002308831.1	predicted protein [Populus trichocarpa]	2.0e-32	52%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NYN8

Fln msg: Distance to subject end: 30 aas, your sequence is shorter than subject: 144 - 207

Fln protein: SGQPFLWVLRSDIAEGQAAILPEGFVERTKKRALFVGWAPQVKVLAHPSVGLFLTHNGWNSTLEAMSMGVPVVGFPYFGDQFLNCRFAKEVWKIGLDFEDVDVDDQKVVMKEEVVDVVMRMMRTAEVEKMKDNVLRLKESATKA

Protein Length: 145

Fln nts: AGCGGACAACCTTTCTTGTGGGTTCTCAGGTCAGATATCGCAGAAGGGCAGGCTGCAATTTTGCCGGAGGGCTTTGTAGAACGAACAAAGAAACGGGCGTTGTTTGTGGGGTGGGCGCCACAGGTAAAAGTCCTTGCCCATCCTTCAGTGGGATTGTTCCTCACACACAATGGATGGAACTCTACGTTGGAGGCCATGAGCATGGGAGTTCCTGTAGTGGGATTCCCTTATTTTGGCGATCAGTTTCTCAACTGCAGATTCGCGAAGGAGGTGTGGAAGATCGGCCTCGATTTTGAAGATGTAGATGTGGATGATCAGAAGGTGGTCATGAAAGAAGAGGTTGTGGATGTTGTGATGAGGATGATGAGAACAGCGGAAGTAGAGAAGATGAAAGACAACGTTCTCAGGCTGAAGGAGTCCGCAACAAAGGCAGT

Fln Alignment:

GD4IA4403HLPOD___SGQPFLWVLRSDIAEGQAAILPEGFVERTKKRALFVGWAPQVKVLAHPSVGLFLTHNGWNSTLEAMSMGVPVVGFPYFGDQFLNCRFAKEVWKIGLDFEXXXXXXXXXXXXXXXXXXXXXXXXTAEVEKMKDNVLRLKESATKA
A9NYN8_______________SGQPFLWVLRLDIAEGKAAILPEGFEERTKKRALFVRWAPQAKVLAHASVGLFLTHSGWNSTLESMSMGVPVVGFPYFGDQFLNCRFAKEVWKIGLDFEDVDLDDRKVVMKEEVEGVVRRMMRTPEGKKMRDKVLRLKESAAKA

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain