UniGene Name: sp_v3.0_unigene77006
Length: 246 nt
This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense
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>sp_v3.0_unigene77006
A |
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If you push the Download ace button, you will download an ace file of this UniGene.
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Source | Descriptions | Term | Type | e value | Identity |
---|---|---|---|---|---|
AutoFact | putative phosphaticid acid phosphatase [Musa acuminata AAA Group] | - | - | 4.0e-18 | 70% |
FL-Next | tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). | - | - | 0.0 | 89% |
Sma3 | Phosphatidic acid phosphatase, putative | - | - | 2.106e-12 | - |
Source | ECs | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | Hydrolases, Acting on ester bonds, Phosphoric monoester hydrolases. | EC:3.1.3.- | - | 9.892e-08 | - |
Source | KEGGs | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | Fructose and mannose metabolism | 00051 | 9.892e-08 | % | |
Sma3 | Ascorbate and aldarate metabolism | 00053 | 9.892e-08 | % | |
Sma3 | Lipopolysaccharide biosynthesis | 00540 | 9.892e-08 | % | |
Sma3 | Ether lipid metabolism | 00565 | 9.892e-08 | % | |
Sma3 | Sphingolipid metabolism | 00600 | 9.892e-08 | % | |
Sma3 | Thiamine metabolism | 00730 | 9.892e-08 | % | |
Sma3 | Riboflavin metabolism | 00740 | 9.892e-08 | % | |
Sma3 | Nicotinate and nicotinamide metabolism | 00760 | 9.892e-08 | % | |
Sma3 | Metabolic pathways | 01100 | 9.892e-08 | % | |
Sma3 | Biosynthesis of secondary metabolites | 01110 | 9.892e-08 | % | |
Sma3 | Phosphatidate phosphatase. | EC:3.1.3.4 | - | 9.892e-08 | - |
Source | KEGGs | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | Glycerolipid metabolism | 00561 | 9.892e-08 | % | |
Sma3 | Glycerophospholipid metabolism | 00564 | 9.892e-08 | % | |
Sma3 | Ether lipid metabolism | 00565 | 9.892e-08 | % | |
Sma3 | Sphingolipid metabolism | 00600 | 9.892e-08 | % | |
Sma3 | Metabolic pathways | 01100 | 9.892e-08 | % |
Source | Gene names |
---|---|
Sma3 | At1g15080; At3g02600; F16B3.23; F9L1.2; GSVIVT00017742001; GSVIVT00030412001; GSVIVT00030413001; GSVIVT00038277001; LPP2; LPP3; OSJNBa0019B22.8-1; OSJNBa0019B22.8-2; OSJNBa0092O08.28-1; OSJNBa0092O08.28-2; OSJNBb0063G05.1; Os01g0139600; Os01g0666000; Os01 |
Source | GOs | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | plasma membrane | GO:0005886 | Cellular Component | 0.0 | - |
Sma3 | chloroplast | GO:0009507 | Cellular Component | 0.0 | - |
Sma3 | membrane | GO:0016020 | Cellular Component | 0.0 | - |
Sma3 | integral to membrane | GO:0016021 | Cellular Component | 0.0 | - |
Sma3 | catalytic activity | GO:0003824 | Molecular Function | 0.0 | - |
Sma3 | peroxidase activity | GO:0004601 | Molecular Function | 0.0 | - |
Sma3 | phosphatidate phosphatase activity | GO:0008195 | Molecular Function | 0.0 | - |
Sma3 | hydrolase activity | GO:0016787 | Molecular Function | 0.0 | - |
Sma3 | abscisic acid mediated signaling pathway | GO:0009738 | Biological Process | 0.0 | - |
Source | InterPros | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | Phosphatidic acid phosphatase type 2/haloperoxidase | IPR000326 | - | 0.0 | - |
Sma3 | Beta tubulin, autoregulation binding site | IPR013838 | - | 0.0 | - |
Sma3 | Phosphatidic acid phosphatase/chloroperoxidase, N-terminal | IPR016118 | - | 0.0 | - |
Sma3 | Bromoperoxidase/chloroperoxidase, C-terminal | IPR016119 | - | 0.0 | - |
Source | Species | ID | Description | e value | Identity |
---|---|---|---|---|---|
ATG | Arabidoptis thaliana | AT1G15080.1 | ATPAP2, ATLPP2, LPP2 lipid phosphate phosphatase 2 chr1:5188080-5189476 FORWARD LENGTH=290 | 1.0e-20 | 65% |
RefSeq | Arabidopsis thaliana | NP_172961.1 | Lipid phosphate phosphatase 2 [Arabidopsis thaliana] | 1.0e-20 | 65% |
RefSeq | Populus trichocarpa | XP_002305178.1 | predicted protein [Populus trichocarpa] | 2.0e-19 | 65% |
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Fln status: Internal
Fln database: coniferopsida.fasta
Fln subject: B8LRB0
Fln msg: Unexpected stop codon in the beginning of your sequence, Distance to subject end: 139 aas, your sequence is shorter than subject: 81 - 338
Fln protein:
L
Protein Length:
82
Fln nts:
A
Fln Alignment:
GD4IA4402D5JK3___NYDNVTQNVICHGDPKVIKEGHKSFPSGHTSAAFAGLGYLSLYFAAKINIFDHQGHA
B8LRB0_______________NYDSVTGNVICHGDRKVIKEGHKSFPSGHTSLAFAGLGYLSLYLAAKINIFDRQGHA
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain