SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene76997

Length: 157 nt

UniGene Fasta

>sp_v3.0_unigene76997
GGTGATAGGGACTTTGTTGCAGAGTTCATGATGTGGGCGAGTTTGACCATGACACACATGAGTCGGATATCCGAGGACTTGATTGTGTATTCTACGGCGGAGTTTGGGTTCGTCACGCTTAGTGATGCATATAGCACAGGATCAAGCATGATGCCAC

Ace file of the UniGene sp_v3.0_unigene76997

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Argininosuccinate lyase n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8NFP0_COPC7	-	-	4.0e-19	84%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	50%

Source	Gene names
Sma3	MICPUCDRAFT_12633; MICPUN_79415; OSTLU_26950; Ot12g03000;

Source	GOs	Term	Type	e value	Identity
Sma3	argininosuccinate lyase activity	GO:0004056	Molecular Function	0.0	-
Sma3	arginine biosynthetic process via ornithine	GO:0042450	Biological Process	0.0	-

Source	InterPros	Term	Type	Identity
Sma3	Fumarate lyase	IPR000362	-	-
Sma3	Delta crystallin	IPR003031	-	-
Sma3	Argininosuccinate lyase	IPR009049	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT5G10920.1	L-Aspartase-like family protein chr5:3441805-3443892 FORWARD LENGTH=517	3.0e-11	50%
RefSeq	Arabidopsis thaliana	NP_196653.1	argininosuccinate lyase [Arabidopsis thaliana]	3.0e-11	50%
RefSeq	Populus trichocarpa	XP_002302345.1	predicted protein [Populus trichocarpa]	2.0e-12	52%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NWV6

Fln msg: Distance to subject end: 183 aas, your sequence is shorter than subject: 52 - 530

Fln protein: GDRDFVAEFMMWASLTMTHMSRISEDLIVYSTAEFGFVTLSDAYSTGSSMMP

Protein Length: 53

Fln nts: GGTGATAGGGACTTTGTTGCAGAGTTCATGATGTGGGCGAGTTTGACCATGACACACATGAGTCGGATATCCGAGGACTTGATTGTGTATTCTACGGCGGAGTTTGGGTTCGTCACGCTTAGTGATGCATATAGCACAGGATCAAGCATGATGCCAC

Fln Alignment:

GD4IA4402EK2T4___DRDFVAEFMMWASLTMTHMSRISEDLIVYSTAEFGFVTLSDAYSTGSSMMP
A9NWV6_______________DRDFLLEFLSANSIIAIHLSRLAEEWVIWATEEFGFLIPSDAVSTGSSIMP

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain