SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene76753

Length: 205 nt

UniGene Fasta

>sp_v3.0_unigene76753
CTGAGAATGATATGGTTATGGAGGACATTGCTGTGGATATACAGACAATATCAAGGGAGACACAAGTGCTTTATCACAGAGCAGGGCCTAGGTCTGAGGTGTGCTTTAGCCCTGCTGATGTCCATGCTGCCATTGTTACATGTGGGAGGTTATCACCTGGTGTTAACACTGTCATCAGAGAGCTTGTAATTGGCCTCTGGTTTCA

Ace file of the UniGene sp_v3.0_unigene76753

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	6-phosphofructokinase 2 n=1 Tax=Arabidopsis thaliana RepID=K6PF2_ARATH	-	-	4.0e-13	55%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	89%

Source	Gene names
Sma3	OSJNBb0021A09.36; OSTLU_29493; Os09g0479800; OsI_03669; OsI_18773; OsI_31779; OsJ_03390; OsJ_17437; OsJ_29767; Ot14g02170; P0463D04.4; P0463G11.19; P0473H02.6; P0638D12.10; P0681D04.18; POPTRDRAFT_1116049; RCOM_1487750;

Source	GOs	Term	Type	Identity
Sma3	6-phosphofructokinase complex	GO:0005945	Cellular Component	-
Sma3	6-phosphofructokinase activity	GO:0003872	Molecular Function	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	glycolysis	GO:0006096	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Phosphofructokinase domain	IPR000023	-	-
Sma3	Peptidase S8/S53, subtilisin/kexin/sedolisin	IPR000209	-	-
Sma3	Protease-associated domain, PA	IPR003137	-	-
Sma3	Proteinase inhibitor I9	IPR010259	-	-
Sma3	Pyrophosphate-dependent phosphofructokinase TP0108	IPR012004	-	-
Sma3	Peptidase S8, subtilisin-related	IPR015500	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT5G47810.1	PFK2 phosphofructokinase 2 chr5:19356569-19357989 REVERSE LENGTH=444	4.0e-18	55%
RefSeq	Arabidopsis thaliana	NP_199592.1	6-phosphofructokinase 2 [Arabidopsis thaliana]	5.0e-18	55%
RefSeq	Populus trichocarpa	XP_002329965.1	predicted protein [Populus trichocarpa]	8.0e-18	57%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LPI7

Fln msg: Distance to subject end: 185 aas, your sequence is shorter than subject: 67 - 311

Fln protein: ENDMVMEDIAVDIQTISRETQVLYHRAGPRSEVCFSPADVHAAIVTCGRLSPGVNTVIRELVIGLWF

Protein Length: 68

Fln nts: CTGAGAATGATATGGTTATGGAGGACATTGCTGTGGATATACAGACAATATCAAGGGAGACACAAGTGCTTTATCACAGAGCAGGGCCTAGGTCTGAGGTGTGCTTTAGCCCTGCTGATGTCCATGCTGCCATTGTTACATGTGGGAGGTTATCACCTGGTGTTAACACTGTCATCAGAGAGCTTGTAATTGGCCTCTGGTTTCA

Fln Alignment:

GD4IA4402EK42M___ENDMVMEDIAVDIQTISRETQVLYHRAGPRSEVCFSPADVHAAIVTCGRLSPGVNTVIRELVIGLWF
B8LPI7_______________EHDMVMENIVVDIQTVSRETQVLYHRAGPRSEVCFSPDEVHAAIVTCGRLSPGVNTVVRELVIGLWF

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain