SustainPineDB

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Assembly info
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SSRs
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ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene76719

Length: 228 nt

UniGene Fasta

>sp_v3.0_unigene76719
GCCATACTCCTATACTCCAGTGTTAAATTTCGGGTAGGTTGGGATGACAGTGTAATGCTGATGCATTTTGTTCATTTTAATTGTTGTGGTTAATTAATTAGCCTATTGGAAATGGAAGCTCCAGTCAGATTAAGCAGCAAAAAAAGNGAAGAGAAGATAGAGGGGAGAAATTCAAGGTAGAAATCACATTTGCTGCAAAGATTTCAATGAAAGCCCTGCAGGCTGTTA

Ace file of the UniGene sp_v3.0_unigene76719

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Argonaute/Zwille-like protein n=2 Tax=Picea RepID=Q4PLA9_PICGL	-	-	1.0e-05	100%
FL-Next	tr=Argonaute/Zwille-like protein; Picea glauca (White spruce) (Pinus glauca).	-	-	0.0	85%
Sma3	Argonaute/Zwille-like protein	-	-	2.437e-06	-

Source	GOs	Term	Type	e value	Identity
Sma3	nucleic acid binding	GO:0003676	Molecular Function	0.0	-

Source	InterPros	Term	Type	Identity
Sma3	Argonaute/Dicer protein, PAZ	IPR003100	-	-
Sma3	Stem cell self-renewal protein Piwi	IPR003165	-	-
Sma3	Domain of unknown function DUF1785	IPR014811	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: Q4PLA9

Fln msg: Unexpected stop codon in the beginning of your sequence, Distance to subject end: 734 aas, your sequence is shorter than subject: 75 - 959

Fln protein: HTPILQC*ISGRLG*QCNADAFCSF*LLWLIN*PIGNGSSSQIKQQKKRREDRGEKFKVEITFAAKISMKALQAV

Protein Length: 76

Fln nts: GCCATACTCCTATACTCCAGTGTTAAATTTCGGGTAGGTTGGGATGACAGTGTAATGCTGATGCATTTTGTTCATTTTAATTGTTGTGGTTAATTAATTAGCCTATTGGAAATGGAAGCTCCAGTCAGATTAAGCAGCAAAAAAAGaGAAGAGAAGATAGAGGGGAGAAATTCAAGGTAGAAATCACATTTGCTGCAAAGATTTCAATGAAAGCCCTGCAGGCTGTTA

Fln Alignment:

GD4IA4402C9J3Q___PIGNGSSSQIKQQKKRREDRGEKFKVEITFAAKISMKALQAV
Q4PLA9_______________PIKDESPSQIEQSKKRREDRGEKFKVEITFAAKISMKALQAV

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain