SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene76028

Length: 469 nt

UniGene Fasta

>sp_v3.0_unigene76028
ACATTGTCCGCCGGCGGCAAGATCGAACGGATCGGTCTTTCTCCCCGCCTCGCCATTCGCGACGCAGCAGGCACAGTGCTGATCGAACGCGAGTGGCCCGACGAACGCGCCATGACCCATGCAGAGTTGCTCGCATGGTTGTTTGACTGGGCCACATCGCATCTCGAAGGGCGCGAAGTCCTCGCCGTCGGGCACCGCGTCGTCCACGGCGGGGTCGACTTCGCCCAGTCGTGCCTGATCGATACCATAGTGCTCGAGGAGCTTGAGAAGCTCTGTCCACTGGCCCCGCTCCACCAGCCCCATAATCTGGCTGCCATCCGCGCGATCGCCGCGCTCGCGCCGGACCTTCCCCAGGTCGCCTGCTTCGACACCGCCTTCCACCATGATCGCCCCGCACCCGCCACCCGCTTCGCGCTCCCGCGCGCACTTCACGAGCAGGGCATCAGGCGCTACGGCTTCCATGGCCTCT

Ace file of the UniGene sp_v3.0_unigene76028

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Acetate kinase 3 n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5ESL9_BRASB	-	-	0.0	61%
FL-Next	tr=Predicted protein; Phaeodactylum tricornutum (strain CCAP 1055/1).	-	-	0.0	47%

Source	Gene names
Sma3	PHYPADRAFT_110540; POPTRDRAFT_589796;

Source	GOs	Term	Type	Identity
Sma3	intracellular	GO:0005622	Cellular Component	-
Sma3	kinase activity	GO:0016301	Molecular Function	-
Sma3	phosphotransferase activity, carboxyl group as acceptor	GO:0016774	Molecular Function	-
Sma3	organic acid metabolic process	GO:0006082	Biological Process	-
Sma3	phosphorylation	GO:0016310	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Aliphatic acid kinase, short-chain	IPR000890	-	0.0	-
Sma3	Acetate/Proprionate kinase	IPR004372	-	0.0	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: B7G0U3

Fln msg: Distance to subject end: 224 aas, your sequence is shorter than subject: 156 - 401

Fln protein: TLSAGGKIERIGLSPRLAIRDAAGTVLIEREWPDERAMTHAELLAWLFDWATSHLEGREVLAVGHRVVHGGVDFAQSCLIDTIVLEELEKLCPLAPLHQPHNLAAIRAIAALAPDLPQVACFDTAFHHDRPAPATRFALPRALHEQGIRRYGFHGL

Protein Length: 157

Fln nts: ACATTGTCCGCCGGCGGCAAGATCGAACGGATCGGTCTTTCTCCCCGCCTCGCCATTCGCGACGCAGCAGGCACAGTGCTGATCGAACGCGAGTGGCCCGACGAACGCGCCATGACCCATGCAGAGTTGCTCGCATGGTTGTTTGACTGGGCCACATCGCATCTCGAAGGGCGCGAAGTCCTCGCCGTCGGGCACCGCGTCGTCCACGGCGGGGTCGACTTCGCCCAGTCGTGCCTGATCGATACCATAGTGCTCGAGGAGCTTGAGAAGCTCTGTCCACTGGCCCCGCTCCACCAGCCCCATAATCTGGCTGCCATCCGCGCGATCGCCGCGCTCGCGCCGGACCTTCCCCAGGTCGCCTGCTTCGACACCGCCTTCCACCATGATCGCCCCGCACCCGCCACCCGCTTCGCGCTCCCGCGCGCACTTCACGAGCAGGGCATCAGGCGCTACGGCTTCCATGGCCTCT

Fln Alignment:

GD4IA4402EQMN0___REVLAVGHRVVHGGVDFAQSCLIDTIVLEELEKLCPLAPLHQPHNXXXXXXXXXXXPDLPQVACFDTAFHHDRPAPATRFALPRALHEQGIRRYGFHG
B7G0U3_______________RRITAVGHRIVHGGEHFTQAVVVDKAVMEKIDALSHLAPLHNPNSLTAIKQCRRELPNIPNIAVFDTSFHHSLPAKSSTYPLPKAYRDAGIRKYGFHG

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain