UniGene Name: sp_v3.0_unigene75960
Length: 158 nt
UniGene Fasta |
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>sp_v3.0_unigene75960
C |
Ace file of the UniGene sp_v3.0_unigene75960 |
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Annotations |
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Source | Descriptions | Term | Type | e value | Identity |
---|---|---|---|---|---|
AutoFact | Os05g0518600 protein (Fragment) n=1 Tax=Oryza sativa Japonica Group RepID=C7J2A4_ORYSJ | - | - | 6.0e-13 | 85% |
FL-Next | sp=Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1; Arabidopsis thaliana (Mouse-ear cress). | - | - | 0.0 | 77% |
Sma3 | Trehalose-6-phosphate synthase, putative | - | - | 5.565e-10 | - |
Source | ECs | Term | Type | e value | Identity |
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Sma3 | Alpha,alpha-trehalose-phosphate synthase (UDP-forming). | EC:2.4.1.15 | - | 3.892e-31 | - |
Source | KEGGs | Term | Type | e value | Identity |
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Sma3 | Starch and sucrose metabolism | 00500 | 3.892e-31 | % | |
Sma3 | Trehalose-phosphatase. | EC:3.1.3.12 | - | 8.003e-07 | - |
Source | KEGGs | Term | Type | e value | Identity |
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Sma3 | Starch and sucrose metabolism | 00500 | 8.003e-07 | % |
Source | Gene names |
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Sma3 | At1g16980; At1g17000; At1g78580; F20D23.30; F6I1.1; GSVIVT00007211001; GSVIVT00027920001; MBP_81C12.6; MICPUCDRAFT_70807; MICPUN_54984; OSTLU_991; OsI_20647; OsJ_19222; Ot01g02410; PHYPADRAFT_135066; PHYPADRAFT_540; POPTRDRAFT_828543; POPTRDRAFT_858427; R |
Source | GOs | Term | Type | e value | Identity |
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Sma3 | extracellular region | GO:0005576 | Cellular Component | 0.0 | - |
Sma3 | cell wall | GO:0005618 | Cellular Component | 0.0 | - |
Sma3 | vacuole | GO:0005773 | Cellular Component | 0.0 | - |
Sma3 | catalytic activity | GO:0003824 | Molecular Function | 0.0 | - |
Sma3 | alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity | GO:0003825 | Molecular Function | 0.0 | - |
Sma3 | sucrose metabolic process | GO:0005985 | Biological Process | 0.0 | - |
Sma3 | trehalose biosynthetic process | GO:0005992 | Biological Process | 0.0 | - |
Sma3 | embryo development ending in seed dormancy | GO:0009793 | Biological Process | 0.0 | - |
Sma3 | plant-type cell wall biogenesis | GO:0009832 | Biological Process | 0.0 | - |
Sma3 | sugar mediated signaling pathway | GO:0010182 | Biological Process | 0.0 | - |
Sma3 | cell division | GO:0051301 | Biological Process | 0.0 | - |
Source | InterPros | Term | Type | e value | Identity |
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Sma3 | Sucrose synthase | IPR000368 | - | 0.0 | - |
Sma3 | Glycosyl transferase, family 20 | IPR001830 | - | 0.0 | - |
Sma3 | Trehalose-phosphatase | IPR003337 | - | 0.0 | - |
Sma3 | Alpha,alpha-trehalose-phosphate synthase | IPR012766 | - | 0.0 | - |
Sma3 | EF-Hand 1, calcium-binding site | IPR018247 | - | 0.0 | - |
Source | Species | ID | Description | e value | Identity |
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ATG | Arabidoptis thaliana | AT1G78580.1 | ATTPS1, TPS1 trehalose-6-phosphate synthase chr1:29552495-29557482 REVERSE LENGTH=942 | 2.0e-14 | 96% |
RefSeq | Arabidopsis thaliana | NP_177979.1 | alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 [Arabidopsis thaliana] | 3.0e-14 | 96% |
RefSeq | Populus trichocarpa | XP_002331300.1 | predicted protein [Populus trichocarpa] | 7.0e-14 | 96% |
Full-Lengther Next Prediction |
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Fln status: Internal
Fln database: sp_plants
Fln subject: Q9SYM4
Fln msg: Separated hits, possible frame ERROR between 56 and 70, Distance to subject end: 623 aas, your sequence is shorter than subject: 52 - 942
Fln protein:
S
Protein Length:
53
Fln nts:
C
Fln Alignment:
GD4IA4402C41VG___SEIYRTLPSRDELLKAVLxxxxxGFHTYDYARHFVSACTRILGLEGTLEGVE
Q9SYM4_______________SEIHRTLPSRSELLRSVLxxxxxGFHTYDYARHFVSACTRILGLEGTPEGVE
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain