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UniGene Name: sp_v3.0_unigene75509
Length: 179 nt
 UniGene Fasta
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| >sp_v3.0_unigene75509
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Ace file of the UniGene sp_v3.0_unigene75509
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If you push the Download ace button, you will download an ace file of this UniGene.
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| Annotations |
|---|
| Source | Descriptions | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| AutoFact | Succinate dehydrogenase [ubiquinone] flavoprotein subunit 2, mitochondrial n=2 Tax=Arabidopsis RepID=DHSA2_ARATH | - | - | 1.0e-09 | 93% |
| FL-Next | sp=Succinate dehydrogenase [ubiquinone] flavoprotein subunit 2, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). | - | - | 0.0 | 64% |
| Sma3 | FP | - | - | 8.582e-13 | - |
| Source | ECs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | Succinate dehydrogenase (ubiquinone). | EC:1.3.5.1 | - | 7.138e-13 | - |
| Source | KEGGs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | Citrate cycle (TCA cycle) | 00020 | 7.138e-13 | % | |
| Sma3 | Oxidative phosphorylation | 00190 | 7.138e-13 | % | |
| Sma3 | Biosynthesis of phenylpropanoids | 01061 | 7.138e-13 | % | |
| Sma3 | Biosynthesis of terpenoids and steroids | 01062 | 7.138e-13 | % | |
| Sma3 | Biosynthesis of alkaloids derived from shikimate pathway | 01063 | 7.138e-13 | % | |
| Sma3 | Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid | 01064 | 7.138e-13 | % | |
| Sma3 | Biosynthesis of alkaloids derived from histidine and purine | 01065 | 7.138e-13 | % | |
| Sma3 | Biosynthesis of alkaloids derived from terpenoid and polyketide | 01066 | 7.138e-13 | % | |
| Sma3 | Biosynthesis of plant hormones | 01070 | 7.138e-13 | % | |
| Sma3 | Metabolic pathways | 01100 | 7.138e-13 | % | |
| Sma3 | Biosynthesis of secondary metabolites | 01110 | 7.138e-13 | % |
| Source | Gene names |
|---|---|
| Sma3 | At2g18450; At5g66760; CHLREDRAFT_195972; GSVIVT00024946001; LOC_Os07g04240; MSN2.16; Os07g0134800; OsI_24801; OsJ_23002; P0507H12.27; PHYPADRAFT_181904; PHYPADRAFT_196863; POPTRDRAFT_219180; POPTRDRAFT_593943; RCOM_0566460; SDH1; SDH1-1; SDH1-2; T30D6.4; |
| Source | GOs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | cell wall | GO:0005618 | Cellular Component | 0.0 | - |
| Sma3 | mitochondrial inner membrane | GO:0005743 | Cellular Component | 0.0 | - |
| Sma3 | succinate dehydrogenase activity | GO:0000104 | Molecular Function | 0.0 | - |
| Sma3 | ATP binding | GO:0005524 | Molecular Function | 0.0 | - |
| Sma3 | succinate dehydrogenase (ubiquinone) activity | GO:0008177 | Molecular Function | 0.0 | - |
| Sma3 | electron carrier activity | GO:0009055 | Molecular Function | 0.0 | - |
| Sma3 | oxidoreductase activity, acting on the CH-CH group of donors | GO:0016627 | Molecular Function | 0.0 | - |
| Sma3 | flavin adenine dinucleotide binding | GO:0050660 | Molecular Function | 0.0 | - |
| Sma3 | tricarboxylic acid cycle | GO:0006099 | Biological Process | 0.0 | - |
| Sma3 | mitochondrial electron transport, succinate to ubiquinone | GO:0006121 | Biological Process | 0.0 | - |
| Sma3 | transport | GO:0006810 | Biological Process | 0.0 | - |
| Sma3 | electron transport chain | GO:0022900 | Biological Process | 0.0 | - |
| Source | InterPros | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | Fumarate reductase/succinate dehydrogenase, FAD-binding site | IPR003952 | - | 0.0 | - |
| Sma3 | Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal | IPR003953 | - | 0.0 | - |
| Sma3 | IPR004112 | - | 0.0 | - | |
| Sma3 | Succinate dehydrogenase, flavoprotein subunit | IPR011281 | - | 0.0 | - |
| Sma3 | FAD-dependent pyridine nucleotide-disulphide oxidoreductase | IPR013027 | - | 0.0 | - |
| Sma3 | Succinate dehydrogenase/fumarate reductase, flavoprotein subunit | IPR014006 | - | 0.0 | - |
| Source | Species | ID | Description | e value | Identity |
|---|---|---|---|---|---|
| ATG | Arabidoptis thaliana | AT2G18450.1 | SDH1-2 succinate dehydrogenase 1-2 chr2:7997510-8000801 REVERSE LENGTH=632 | 6.0e-12 | 93% |
| RefSeq | Arabidopsis thaliana | NP_179435.1 | succinate dehydrogenase [ubiquinone] flavoprotein subunit 2 [Arabidopsis thaliana] | 8.0e-12 | 93% |
| RefSeq | Populus trichocarpa | XP_002310225.1 | predicted protein, partial [Populus trichocarpa] | 4.0e-11 | 73% |
| Full-Lengther Next Prediction |
|---|
Fln status: Internal
Fln database: sp_plants
Fln subject: Q9ZPX5
Fln msg: Separated hits, possible frame ERROR between 43 and 93, Distance to subject end: 101 aas, your sequence is shorter than subject: 60 - 632
Fln protein:
M
Protein Length:
61
Fln nts:
G
Fln Alignment:
GFIJCBT03F1VKQ___MDKLRNANGSLPASxxxxxxxxxxxxxxxxxMQRVMQNNAAVFRTQETLEEGCTLIDETW
Q9ZPX5_______________LDRIRNSNGSLPTSxxxxxxxxxxxxxxxxxMQRVMQNNAAVFRTQETLEEGCDLIDKTW
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain
