SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene75451

Length: 349 nt

UniGene Fasta

>sp_v3.0_unigene75451
GTGAGATTAAAACACAAATGTGGATCTGCCACAAGAAAGACAAGGTGTCAATGTCCAAGTTCAACTCCACTGCAGGGCATTCAGTGAGGAAGAATTGAGAAGCAACGCACCTCAAGTTGTAACATGTAATGACTTCCTGCGAGAATTTATTGTTTGTCAAAATATCTCCAGCGCAAATCGATTGAACGTTTACATTCGACAAGGTAATGGCCACGGAAATGATGATACAAACTATGTTGAGCTTACATCATATGTCAAAGACGATGATGATGAGGATGGTGATGGCATTGGTAATGATGAAGTGGACGAGACTACAAGGATGGTCATGATGGTGATCATGGAAATGATC

Ace file of the UniGene sp_v3.0_unigene75451

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Kinesin, motor region [Medicago truncatula]	-	-	3.0e-10	68%
FL-Next	sp=125 kDa kinesin-related protein; Nicotiana tabacum (Common tobacco).	-	-	0.0	62%

Source	Gene names
Sma3	At2g36200; F2H17.19; GSVIVT00021588001; MtrDRAFT_AC150442g20v2; POPTRDRAFT_832044; RCOM_0293150;

Source	GOs	Term	Type	Identity
Sma3	cytoplasm	GO:0005737	Cellular Component	-
Sma3	microtubule	GO:0005874	Cellular Component	-
Sma3	microtubule associated complex	GO:0005875	Cellular Component	-
Sma3	microtubule motor activity	GO:0003777	Molecular Function	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	microtubule-based movement	GO:0007018	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Kinesin, motor domain	IPR001752	-	0.0	-
Sma3	Pentatricopeptide repeat	IPR002885	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT2G36200.2	P-loop containing nucleoside triphosphate hydrolases superfamily protein chr2:15180078-15185189 REVERSE LENGTH=1040	1.0e-12	66%
RefSeq	Arabidopsis thaliana	NP_181162.2	kinesin family member 11 [Arabidopsis thaliana]	1.0e-12	66%
RefSeq	Populus trichocarpa	XP_002309420.1	predicted protein [Populus trichocarpa]	1.0e-13	67%

Full-Lengther Next Prediction

Fln status: Putative N-terminus

Fln database: sp_plants

Fln subject: O23826

Fln msg: Distance to subject end: 898 aas, W1: There is no M at the beginning, your sequence is shorter than subject: 113 - 1006

Fln protein: NTNVDLPQERQGVNVQVQLHCRAFSEEELRSNAPQVVTCNDFLREFIVCQNISSANRLNVYIRQGNGHGNDDTNYVELTSYVKDDDDEDGDGIGNDEVDETTRMVMMVIMEMI

Protein Length: 114

Fln nts: GTGAGATTAAAACACAAATGTGGATCTGCCACAAGAAAGACAAGGTGTCAATGTCCAAGTTCAACTCCACTGCAGGGCATTCAGTGAGGAAGAATTGAGAAGCAACGCACCTCAAGTTGTAACATGTAATGACTTCCTGCGAGAATTTATTGTTTGTCAAAATATCTCCAGCGCAAATCGATTGAACGTTTACATTCGACAAGGTAATGGCCACGGAAATGATGATACAAACTATGTTGAGCTTACATCATATGTCAAAGACGATGATGATGAGGATGGTGATGGCATTGGTAATGATGAAGTGGACGAGACTACAAGGATGGTCATGATGGTGATCATGGAAATGATC

Fln Alignment:

GFIJCBT03GSEUC___LPQERQGVNVQVQLHCRAFSEEELRSNAPQVVTCNDFLREFIVCQNIS
O23826_______________MSNKEKGVNVQVLLRCRPFSNDELRNNAPQVVTCNDYQREVAVSQNIA

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain