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UniGene Name: sp_v3.0_unigene75414
Length: 200 nt
This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense
 UniGene Fasta (sense)
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| >sp_v3.0_unigene75414
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Ace file of the UniGene sp_v3.0_unigene75414 (antisense)
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If you push the Download ace button, you will download an ace file of this UniGene.
To watch this ACE file you will need an ACE viewer program as Tablet:
Go to the Tablet ACE viewer Web
| Annotations |
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| Source | Descriptions | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| AutoFact | Laccase n=1 Tax=Pinus taeda RepID=Q9AUI0_PINTA | - | - | 1.0e-10 | 82% |
| FL-Next | tr=Laccase; Pinus taeda (Loblolly pine). | - | - | 0.0 | 82% |
| Sma3 | Laccase | - | - | 2.502e-40 | - |
| Source | ECs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | Laccase. | EC:1.10.3.2 | - | 0.0 | - |
| Sma3 | L-ascorbate oxidase. | EC:1.10.3.3 | - | 2.424e-31 | - |
| Source | KEGGs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | Ascorbate and aldarate metabolism | 00053 | 2.424e-31 | % | |
| Sma3 | Metabolic pathways | 01100 | 2.424e-31 | % |
| Source | Gene names |
|---|---|
| Sma3 | At1g18140; At2g29130; At2g38080; At3g09220; At5g01040; At5g01050; At5g03260; At5g05390; At5g07130; At5g58910; At5g60020; F15A17_290; F16M14.1; F3L24.9; F7J8.20; F7J8.30; GLac1; GLac3; GSVIVT00001781001; GSVIVT00008641001; GSVIVT00017803001; GSVIVT00018427 |
| Source | GOs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | apoplast | GO:0048046 | Cellular Component | 0.0 | - |
| Sma3 | copper ion binding | GO:0005507 | Molecular Function | 0.0 | - |
| Sma3 | laccase activity | GO:0008471 | Molecular Function | 0.0 | - |
| Sma3 | oxidoreductase activity | GO:0016491 | Molecular Function | 0.0 | - |
| Sma3 | response to water deprivation | GO:0009414 | Biological Process | 0.0 | - |
| Sma3 | secondary cell wall biogenesis | GO:0009834 | Biological Process | 0.0 | - |
| Sma3 | vegetative to reproductive phase transition of meristem | GO:0010228 | Biological Process | 0.0 | - |
| Sma3 | lignin catabolic process | GO:0046274 | Biological Process | 0.0 | - |
| Sma3 | oxidation-reduction process | GO:0055114 | Biological Process | 0.0 | - |
| Source | InterPros | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | Peptidase, cysteine peptidase active site | IPR000169 | - | 0.0 | - |
| Sma3 | Multicopper oxidase, type 1 | IPR001117 | - | 0.0 | - |
| Sma3 | Multicopper oxidase, copper-binding site | IPR002355 | - | 0.0 | - |
| Sma3 | Cupredoxin | IPR008972 | - | 0.0 | - |
| Sma3 | TonB box, conserved site | IPR010916 | - | 0.0 | - |
| Sma3 | Multicopper oxidase, type 2 | IPR011706 | - | 0.0 | - |
| Sma3 | Multicopper oxidase, type 3 | IPR011707 | - | 0.0 | - |
| Sma3 | Laccase | IPR017761 | - | 0.0 | - |
| Sma3 | Glycoside hydrolase, family 1, active site | IPR018120 | - | 0.0 | - |
| Source | Species | ID | Description | e value | Identity |
|---|---|---|---|---|---|
| ATG | Arabidoptis thaliana | AT5G03260.1 | LAC11 laccase 11 chr5:777198-779338 REVERSE LENGTH=557 | 4.0e-15 | 68% |
| RefSeq | Arabidopsis thaliana | NP_195946.2 | laccase 11 [Arabidopsis thaliana] | 5.0e-15 | 68% |
| RefSeq | Populus trichocarpa | XP_002310245.1 | predicted protein [Populus trichocarpa] | 7.0e-15 | 70% |
| Full-Lengther Next Prediction |
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Fln status: Internal
Fln database: coniferopsida.fasta
Fln subject: Q9AUI0
Fln msg: Unexpected stop codon in the beginning of your sequence, Distance to subject end: 303 aas, your sequence is shorter than subject: 66 - 555
Fln protein:
*
Protein Length:
67
Fln nts:
C
Fln Alignment:
GFIJCBT03GLC72___FRASPTVKKTYLLRIINAALNQEVFFGVANHHLTVVEVDAVYTKP
Q9AUI0_______________FALSVEPDKTYLLRIIKA-LNQEVFFGVANHHLTVVEVDAVYTKP
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain
