SustainPineDB

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Assembly info
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SSRs
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ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene75324

Length: 146 nt

UniGene Fasta

>sp_v3.0_unigene75324
CTACATCCGTGTGGCTTGAGGTCACTGAGGTGAATGGTGAGGATGTGGTTTGCCTGATAAAGAACTCTGCAACTTTGGCTGGGCAGCTTTTTTACTTTGCACGTCTCTCAAATCCAATATCGATCTTCCTACCCTCACTGATAAAG

Ace file of the UniGene sp_v3.0_unigene75324

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Pyruvate kinase (Fragment) n=3 Tax=Vitis vinifera RepID=D7UBT5_VITVI	-	-	3.0e-08	73%
FL-Next	sp=Pyruvate kinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	58%
Sma3	Pyruvate kinase	-	-	1.247e-15	-

Source	ECs	Term	Type	e value	Identity
Sma3		EC:2.7.1.4-	-	2.813e-18	-

Source	Gene names
Sma3	GSVIVT00010814001; GSVIVT00021709001; LOC_Os11g05110; Os11g0148500; OsI_35105; OsJ_32969; POPTRDRAFT_589553; POPTRDRAFT_832481; POPTRDRAFT_833892; RCOM_0840740; VITISV_026975;

Source	GOs	Term	Type	Identity
Sma3	magnesium ion binding	GO:0000287	Molecular Function	-
Sma3	pyruvate kinase activity	GO:0004743	Molecular Function	-
Sma3	potassium ion binding	GO:0030955	Molecular Function	-
Sma3	glycolysis	GO:0006096	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Pyruvate kinase	IPR001697	-	-
Sma3	Pyruvate kinase, barrel	IPR015793	-	-
Sma3	Pyruvate kinase, alpha/beta	IPR015794	-	-
Sma3	Pyruvate/Phosphoenolpyruvate kinase	IPR015813	-	-

Source	Species	ID	Description	e value	Identity
RefSeq	Populus trichocarpa	XP_002311045.1	predicted protein [Populus trichocarpa]	8.0e-12	71%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LLZ7

Fln msg: Distance to subject end: 321 aas, your sequence is shorter than subject: 48 - 527

Fln protein: TSVWLEVTEVNGEDVVCLIKNSATLAGQLFYFARLSNPISIFLPSLIK

Protein Length: 49

Fln nts: CTACATCCGTGTGGCTTGAGGTCACTGAGGTGAATGGTGAGGATGTGGTTTGCCTGATAAAGAACTCTGCAACTTTGGCTGGGCAGCTTTTTTACTTTGCACGTCTCTCAAATCCAATATCGATCTTCCTACCCTCACTGATAAAG

Fln Alignment:

GFIJCBT03GMIAI___TSVWLEVTEVNGEDVVCLIKNSATLAGQLFYFARLSNPISIFLPSL
B8LLZ7_______________TSVWLEVAEMKGQDVVCLVKNTATLAGSL--FTMHASQVRIDLPTL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain