SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene75204

Length: 289 nt

UniGene Fasta

>sp_v3.0_unigene75204
ATGTATCTGATCCTTACAGATGGCTGGAATACCCTGATGCAAAGGACACCAATTATTTTGTTGAGAAACAAGTTTCCATAACTGAATCAGTGCTACAGACATGTCCGACAAGAGAGAAACTGAAAAAGCGCATGGCAACTCTTTATGACCCCAACACTGGGCTCCCAGTTGATAATGTCTGGGATGTCCAGGATAATCGGGAAGCAGAACCACAGGTCTTACGCTTGCTAATGTTAAAGCCCCCATTTTCATATTAGCCGCCGAGTTCCTTGTCAAAGAGGGATATACA

Ace file of the UniGene sp_v3.0_unigene75204

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Prolyl endopeptidase, putative n=1 Tax=Ricinus communis RepID=B9R8I0_RICCO	-	-	2.0e-13	45%
FL-Next	tr=Prolyl oligopeptidase; Coffea arabica (Arabian coffee).	-	-	0.0	46%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: H2D7F1

Fln msg: Unexpected STOP codon at 3' end. Distance to subject end: 588 aas, your sequence is shorter than subject: 85 - 731

Fln protein: VSDPYRWLEYPDAKDTNYFVEKQVSITESVLQTCPTREKLKKRMATLYDPNTGLPVDNVWDVQDNREAEPQVLRLLMLKPPFSY*

Protein Length: 86

Fln nts: ATGTATCTGATCCTTACAGATGGCTGGAATACCCTGATGCAAAGGACACCAATTATTTTGTTGAGAAACAAGTTTCCATAACTGAATCAGTGCTACAGACATGTCCGACAAGAGAGAAACTGAAAAAGCGCATGGCAACTCTTTATGACCCCAACACTGGGCTCCCAGTTGATAATGTCTGGGATGTCCAGGATAATCGGGAAGCAGAACCACAGGTCTTACGCTTGCTAATGTTAAAGCCCCCATTTTCATATTAGCCGCCGAGTTCCTTGTCAAAGAGGGATATACA

Fln Alignment:

GFIJCBT03FX04L___VSDPYRWLEYPDAKDTNYFVEKQVSITESVLQTCPTREKLKKRMATLYD-----------------PNTGLPVDNVWDVQDNREAEPQVL
H2D7F1_______________VSDPYRWLEDPDSEETKEFVEKQVKLTDSVLKTCETREKLREKITALFDFPRYDAPFRAANKYFYFHNTGLQPQSVLYVQDGLDGKPEVL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain