SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene75186

Length: 261 nt

UniGene Fasta

>sp_v3.0_unigene75186
AAGGAAAGGAAGTTGAATTGAGGGGTATCGAAGGGAAAGAGGGAAAGGTAATCAACTCTAACAGCATGACAAAACTTCTAAGTAACGAAAAACATGGTGTAATTTCACAATTATGTTCACTAGAGGATCCCATATCGAAATCATGTATTTCTCTAGATCCTCAAAATGTTTTGGACAATCATTCCAAGGTATTTGAGAGTCCTAAAGGCCTCCCACCTATTCATGATCATGATCATGCTATTCATTTGATTCGAGGAAGTG

Ace file of the UniGene sp_v3.0_unigene75186

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q8W151_ORYSJ	-	-	5.0e-06	36%
FL-Next	tr=Polyprotein; Oryza sativa subsp. japonica (Rice).	-	-	0.0	36%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: Q8W151

Fln msg: Distance to subject end: 621 aas, your sequence is shorter than subject: 86 - 775

Fln protein: GKEVELRGIEGKEGKVINSNSMTKLLSNEKHGVISQLCSLEDPISKSCISLDPQNVLDNHSKVFESPKGLPPIHDHDHAIHLIRGS

Protein Length: 87

Fln nts: AAGGAAAGGAAGTTGAATTGAGGGGTATCGAAGGGAAAGAGGGAAAGGTAATCAACTCTAACAGCATGACAAAACTTCTAAGTAACGAAAAACATGGTGTAATTTCACAATTATGTTCACTAGAGGATCCCATATCGAAATCATGTATTTCTCTAGATCCTCAAAATGTTTTGGACAATCATTCCAAGGTATTTGAGAGTCCTAAAGGCCTCCCACCTATTCATGATCATGATCATGCTATTCATTTGATTCGAGGAAGTG

Fln Alignment:

GFIJCBT03GU2E7___GKEVELRGI--EGKEGKVINSNSMTKLLSNEKHGVISQLCSLEDPISKSCISLDPQNVLDNHSKVFESPKGLPPIHDHDHAIHLIRGS
Q8W151_______________GKSVTLQGIVPELQQCQMISTQQLKEFDDRRAVAHFVQLCSLDDKESSEQIPVKIQHVLQEFASVFDEPMGLPPTQSFDHTIPLIPGA

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain